KEGG T00041: AT5G63110

Arabidopsis thaliana (thale cress): AT5G63110

Entry

AT5G63110 CDS T00041

Gene name

HDA6

Definition

histone deacetylase 6

Orthology

K06067

histone deacetylase 1/2 [EC:3.5.1.98]

Organism

ath Arabidopsis thaliana (thale cress)

Class

SSDB

Motif

Pfam:

Hist_deacetyl

Other DBs

NCBI-GI:

NCBI-GeneID:

MIPS:

TAIR:

UniProt:

Position

AA seq 471 aa
MEADESGISLPSGPDGRKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIIHYHLHRR
LEISRPSLADASDIGRFHSPEYVDFLASVSPESMGDPSAARNLRRFNVGEDCPVFDGLFD
FCRASAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFK
RVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDVGAEKGKYYALNVPL
NDGMDDESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFL
RSYNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHVDPS
PMENLNTPKDMERIRNTLLEQLSGLIHAPSVQFQHTPPVNRVLDEPEDDMETRPKPRIWS
GTATYESDSDDDDKPLHGYSCRGGATTDRDSTGEDEMDDDNPEPDVNPPSS

NT seq 1416 nt +upstreamnt +downstreamnt
atggaggcagacgaaagcggcatctctctgccgtcgggacccgacggacgtaagcggcga
gtcagttacttctacgagccgacgatcggagactactactacggtcaaggccacccgatg
aagcctcaccggatccgtatggctcatagcctaatcattcactatcacctccaccgtcgc
ttagaaatcagtcgccctagcctcgctgacgcctccgatatcggccgattccattcgccg
gagtatgttgacttcctcgcttccgtttcgccggaatctatgggcgatccttccgctgca
cgaaacctaaggcgattcaatgtcggtgaggattgtcctgtcttcgacggactttttgat
ttttgccgtgcttccgccggaggttctattggtgctgccgtcaaattaaacagacaggac
gctgatatcgctatcaattggggcggtgggcttcaccatgctaagaaaagcgaggcttct
gggttttgctatgtaaacgacatcgtgctagggattctggagttgctcaagatgtttaag
cgggttctctacatagatattgatgtccaccatggagatggagtggaagaagcgttttac
accactgatagagttatgactgtttctttccacaaatttggggactttttcccaggaact
ggtcacataagagatgttggcgctgaaaaagggaaatactatgctctaaatgttccacta
aacgatggtatggacgatgaaagtttccgcagcttgtttagacctcttatccagaaggtt
atggaagtgtatcagccagaggcagttgttcttcagtgtggtgctgactccttaagtggt
gatcggttgggttgcttcaacttatcagtcaagggtcacgctgattgccttcggttctta
agatcttacaacgttcctctcatggtgttgggtggtggagggtatactattcgaaatgtt
gcccgttgctggtgttatgagactgcagttgctgttggagtagagccggacaacaaactc
ccttacaatgagtattttgagtatttcggcccagattatacgcttcatgtcgacccaagt
cctatggagaatttaaacacgcccaaagatatggagaggataaggaacacgttgctggaa
caactttcgggactaatacacgcacctagcgtccagtttcagcacacaccaccagtcaat
cgagttttggacgagccggaagatgacatggagacaagaccaaaacctcgcatctggagt
ggaactgcgacttatgaatcagacagtgacgatgatgataaacctcttcatggttactca
tgtcgtggtggcgcaactacggacagggactctaccggtgaagatgaaatggatgacgat
aacccagagccagacgtgaatcctccatcgtcttaa

All links

Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (4)   
   UniGene (1)   
   MIPS-ATH (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (1)   
   Pfam (1)   
All databases (24)   

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