KEGG T00041: At1g67750

Arabidopsis thaliana (thale cress): AT1G67750

Entry

AT1G67750 CDS T00041

Definition

putative pectate lyase 5

Orthology

K01728

pectate lyase [EC:4.2.2.2]

Organism

ath Arabidopsis thaliana (thale cress)

Pathway

ath00040

Pentose and glucuronate interconversions

Class

Metabolism; Carbohydrate metabolism; Pentose and glucuronate interconversions [PATH:ath00040]

SSDB

Motif

Pfam:

Pec_lyase_C Beta_helix Pectate_lyase_3 NosD

Other DBs

NCBI-GI:

NCBI-GeneID:

MIPS:

TAIR:

UniProt:

Position

AA seq 408 aa
MRMTLVHLSLSLFSCLLLVLSPTFIASTPVSEPELVVQEVNEKINASRRNLGVLSCGTGN
PIDDCWRCDPKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSSDKDVVNPKPGTLRHA
VIQDEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGACITVQYVTNIIIHGVN
IHDCKRKGNAYVRDSPSHYGWRTASDGDAVSIFGGSHVWVDHCSLSNCADGLIDAIHGST
AITISNNYLSHHNKVMLLGHSDSYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNN
DYTHWQMYAIGGSAAPTINSQGNRFLAPNDHVFKEVTKYEDAPRSKWKKWNWRSEGDLFL
NGAFFTPSGGGASSSYAKASSLSARPSSLVASVTSNAGALFCRKGSRC

NT seq 1227 nt +upstreamnt +downstreamnt
atgagaatgacacttgttcacttgtctctctccctcttctcatgtctcctccttgtcctt
tctccgaccttcattgcctccactcccgtctccgaacccgaactcgtagttcaagaagtt
aacgaaaagattaatgcgtctaggaggaatctaggcgtgctctcatgtgggaccggaaat
ccaattgacgactgttggagatgcgacccgaaatgggagaaaaaccgacaacggttagcc
gattgcgcgatcgggtttggcaaacacgcaatcggtggtcgtgacggtaaaatctacgtg
gtgactgactcgagtgacaaagacgtggttaaccctaaacccggaacccttagacacgcg
gtgatccaagacgagccactatggatcatcttcgcgcgtgacatggtcataaaactaaaa
gaagagctgattatgaactctttcaagactatagacggccgtggagcgagcgtccacatt
gctggtggcgcgtgtatcaccgtccagtacgtgaccaacatcatcatccacggtgttaac
atccatgactgtaaaagaaaggggaatgcttacgttagagactctccgtcgcattatggg
tggaggacagcgtctgacggtgacgccgtctcgatttttggtggctcccacgtgtgggta
gaccattgctcgttgtccaactgcgctgacggtctgatagacgccattcatggatcaacg
gccattactatctctaataactatttgagtcaccacaataaagtcatgcttttgggacac
agtgattcgtacacgagagacaagaacatgcaagtcaccattgcctttaatcactttgga
gaaggtcttgttcagagaatgccaagatgtagacatggatattttcatgtggtgaataat
gattatacacattggcaaatgtatgcaattggtggaagtgcagctccaacgattaacagt
caaggcaataggtttcttgctccaaacgaccatgtctttaaagaggtgactaaatacgaa
gatgcaccacgaagcaaatggaagaaatggaattggagatcggaaggtgatttgttccta
aacggtgcgttttttacgccttcgggtggaggagcctcttcaagctatgctaaggcttcg
agtttgtcggctagaccgtcctcattggtggcttcagtcacgtccaatgctggtgcactc
ttttgtagaaaaggatcacgatgttaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (3)   
   UniGene (1)   
   MIPS-ATH (1)   
   OC (1)   
   TAIR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

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