KEGG   Arabidopsis thaliana (thale cress): AT5G01630
Entry
AT5G01630         CDS       T00041                                 
Symbol
BRCA2B
Name
(RefSeq) BRCA2-like B
  KO
K08775  breast cancer 2 susceptibility protein
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AT5G01630 (BRCA2B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT5G01630 (BRCA2B)
   03036 Chromosome and associated proteins [BR:ath03036]
    AT5G01630 (BRCA2B)
   03400 DNA repair and recombination proteins [BR:ath03400]
    AT5G01630 (BRCA2B)
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   BRCC complex
    AT5G01630 (BRCA2B)
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     AT5G01630 (BRCA2B)
DNA repair and recombination proteins [BR:ath03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA complex
     AT5G01630 (BRCA2B)
   FA (Fanconi anemia) pathway
    Downstream FA components
     AT5G01630 (BRCA2B)
SSDB
Motif
Pfam: BRCA-2_OB1 BRCA2 BRCA-2_helical
Other DBs
NCBI-GeneID: 831710
NCBI-ProteinID: NP_195783
TAIR: AT5G01630
UniProt: Q7Y1C4
Position
5:complement(234851..241106)
AA seq 1155 aa
MSTWHLFSDSSGDGFRWEVAGRILQSVSDSTPTKALESTAPLPSMADLLLQGCSKLIERE
ESMPGEIPMFRTGLGKSVVLKESSIAKAKSILAENVAYSDLQNTNCSIPQTRQVDTAETM
PMFRTALGKTVPLKESSIAKPLSILGSDMIIDSDNVLPRESGFGVPNSLFQTASNKKVNV
SSAGLARAKALLGLEEDDLNGFNHVNQSSSSLQQHGWSGLKTHEEFDATVVKHHSGTPGQ
YENYVSGKRSEILNPSLKVPPTKFQTAGGKSLSVSAEALKRARNLLGDPELGSFFDDVAG
GDQFFTPQKDERLSDIAINNGSVNTGYIAHEEKTSNKHTSNSFVSPLHSSSKQFRSVNLE
NLASGGNLIKKFDTAVDETNCALNISKPATHGLSNNRPLASDMAVNNSKGNGFIPRARQL
GRPADQPLVDITNRRDTAYANNKQDSTQKKRLGKTVSVSPFKRPRISSFKTPLKKNAQQA
SSGLSVVSCDTLTSKKVLSTRYPEKSPRVYIKEFFGMHPTATTRMDYVPDHVRRIKSSNA
DKYVFCDESSSNKVGAETFLQMLAESGASLQHASRKWVTNHYRWIVWKLACYDIYYPAKC
RGNFLTITNVLEELKYRYEREVNHGHCSAIKRILSGDAPASSMMVLCISAINPRTDNGSQ
EAHCSDNCSNVKVELTDGWYSMNAALDVVLTKQLNAGKLFVGQKLRILGAGLSGWATPTS
PLEAVISSTICLLLNINGTYRAHWADRLGFCKEIGVPLAFNCIKCNGGPVPKTLAGITRI
YPILYKERLGEKKSIVRSERIESRIIQLHNQRRSALVEGIMCEYQRGINGVHSQNDTDSE
EGAKVFKLLETAAEPELLMAEMSLEQLTSFTTYKAKFEAAKQMQMEKSVAKALEDAGLGE
RNVTPFMRIRLVGLTSLSNEGEHNPKEGIVTIWDPTERQRTELTEGKIYIMKGLVPMNSD
SETLYLHARGSSSRWQPLSPKDSENFQPFFNPRKPISLSNLGEIPLSSEFDIAAYVVYVG
DAYTDVLQKKQWVFVTDGSTQHSGEISNSLLAISFSTPFMDDSSVSHISHNLVGSVVGFC
NLIKRAKDATNEMWVAETTENSVYFINAEAAYSSHLKTRSAHIQTWAKLYSSKSVIHELR
QRVLFIIGACKSPSC
NT seq 3468 nt   +upstreamnt  +downstreamnt
atgtcgacgtggcatttattttccgattccagcggcgatggtttccggtgggaagtcgct
ggccggattcttcagtccgtctcggattctacgccaaccaaggcgctcgaatcgacagct
cctctaccttccatggccgatctcttgctccaaggatgctcgaagcttatagaacgggaa
gaatcgatgcctggggaaatcccaatgttcaggactgggctggggaagtctgtagttctt
aaagagtcttcgattgctaaagccaaatccattttagcagagaatgttgcttattcagat
ttgcagaacacaaattgctcaattccccaaacgagacaagtggatacagctgaaactatg
ccaatgttcaggacggccttggggaaaactgtccctttgaaagagtcttcaattgccaaa
cctttgtctattctaggaagtgatatgataattgactcagacaacgttcttcccagggag
agtgggtttggtgttcccaacagtctttttcagacagcttccaacaaaaaggttaatgta
tcttctgccggtttagcaagagccaaggcattgttaggactagaagaagatgatttgaat
ggatttaaccatgtgaaccagtcgtcttcttccctccagcaacatgggtggtccggttta
aaaactcatgaggagtttgatgctacagtggttaagcatcattcaggaactccaggacaa
tatgagaattatgtatctgggaagagatctgaaatcttaaatccatcgttaaaggtgcct
ccaacaaagtttcagactgctggtggaaaatcattgtcagtgtcagctgaggcgttgaaa
cgtgccagaaaccttcttggtgaccctgagttagggtctttctttgatgatgtagctgga
ggtgatcaattttttacaccacagaaagatgaaaggctaagtgatattgctataaacaat
ggaagtgtcaacacaggttatattgctcatgaagaaaagacaagcaacaaacatacgtca
aatagttttgtatctcctcttcattcatcttcaaagcaatttagatcagttaacttggag
aacctagcttcagggggtaatttgatcaagaaatttgatacggctgttgatgagaccaat
tgtgctctgaatatcagtaaacctgctacacatggactatcaaataacaggcctttagca
tcagatatggcagtgaataattccaagggaaacggtttcattccaagagctaggcaactt
ggaaggcctgctgatcagccacttgttgatataacaaatcgcagagatacagcttatgca
aacaataaacaagacagtacccaaaagaaaaggctgggaaagacagtctccgtttctcct
ttcaaaaggccaaggatttcatcctttaaaactcctttaaagaaaaatgctcagcaagct
tcaagtggtttgtctgttgtatcgtgtgatacacttacttccaaaaaggtactttctaca
agatatccagaaaagtctccaagagtatatatcaaggagttttttggaatgcatccgaca
gctacgaccaggatggattatgtgccagaccatgtcagaagaatcaaatcaagtaatgca
gataaatatgtattctgtgatgagtcttcttcaaacaaggttggagctgaaacttttctt
caaatgttggctgagtcgggtgcttccttacaacatgcatccagaaagtgggttactaat
cactacaggtggatagtctggaaacttgcatgctacgacatatactacccagccaaatgc
agaggaaactttctaacaatcaccaatgttcttgaggaactaaaatacagatatgagaga
gaggtcaatcatggtcattgctctgcaatcaagaggattctgagtggtgatgctccagct
tcttcaatgatggtcctctgcatatcagctattaatccaaggaccgataatggttctcag
gaagcacattgttctgataattgcagcaatgtgaaagtcgaactcactgatgggtggtac
tcgatgaatgctgctctggatgtcgtgctaaccaagcagctgaatgctggcaaattgttt
gtggggcagaagcttcgaatcctcggggcaggactttctggctgggctaccccaacatca
ccacttgaggcagtgatttcaagtacaatctgtttgttgttgaatattaatgggacatac
agagctcactgggcggaccgactaggcttctgtaaagaaattggtgtccctctggctttc
aactgtatcaagtgcaatgggggtccagtgcctaaaacgctagctggcatcacacgaata
taccccatcctatacaaggaaaggttaggtgaaaagaagtcaatagttcgatcagagaga
atagaaagtagaattatacagctgcataatcagaggcgctcagctcttgttgagggtatt
atgtgtgagtaccagagaggaattaatggtgttcacagccaaaacgatactgacagcgaa
gaaggagccaaggtctttaagctgttagagacggctgctgaacctgaacttcttatggct
gaaatgagcctagagcagttgacatctttcactacatataaagcaaaatttgaggcagcc
aagcaaatgcagatggaaaaatcagtggcaaaagctctggaagacgctggtttaggtgaa
aggaacgtcaccccattcatgaggattaggcttgttggcctgacgagcttaagtaatgaa
ggagagcacaatccaaaagaaggcattgtaacaatctgggatcccacggagagacagaga
accgagctgacggaggggaaaatatacataatgaaagggctagtaccaatgaactcagat
tcagaaacactttacttacatgccagagggtcaagctcaagatggcagcctttgtctcca
aaagattctgaaaattttcagccttttttcaaccctcgtaaaccaatctctttgtcaaat
cttggtgaaattcctctgtcaagtgaatttgatatcgctgcgtacgttgtatatgttgga
gatgcatacacagatgttctacaaaagaagcagtgggtgtttgtgacagatggatccaca
caacattcaggggaaatctcaaacagtcttcttgctataagcttcagcaccccattcatg
gatgatagctctgtttcccacatcagccataatttggttggatccgtggtcggattttgc
aatctaattaaaagagcaaaggatgcgacaaacgaaatgtgggttgctgagacaacagag
aactcagtctacttcataaacgcagaagctgcctactcttctcaccttaaaacccgcagt
gcccatatccaaacatgggctaagctctattcttccaaatccgtcatccatgaacttcgg
caaagagtcctatttataatcggtgcttgtaaatcaccttcatgctga

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