KEGG   Anaerolinea thermophila: ANT_19070
Entry
ANT_19070         CDS       T01410                                 
Name
(GenBank) hypothetical protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
atm  Anaerolinea thermophila
Pathway
atm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:atm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ANT_19070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atm03019]
    ANT_19070
Messenger RNA biogenesis [BR:atm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ANT_19070
SSDB
Motif
Pfam: RNase_J_C RMMBL Lactamase_B Lactamase_B_2 DUF4453
Other DBs
NCBI-ProteinID: BAJ63933
UniProt: E8N669
Position
complement(2141345..2142991)
AA seq 548 aa
MSNGILRVIPLGGLGEVGRNLMVYEYDNEILVVDAGLMFPENDMLGIDYIIPDMTYLAQN
HTKVKGIVITHGHEDHIGAIHHLLDQVNAPIYATPLTRGLLEVKLGRNGHGSKADLRTVQ
AGETVQIGPFQVEFYHVCHSIPDGVGLGILTPAGLIVHSGDYKFDHTPVDGKSTDYAKLA
EFSKRGVLALLADSTNAERPGWTPSEKTIDAAFDQVFSEAKGRIIIASFASLISRMQQAA
NAALRHGRKIAFVGASMLDNMKMARKLGYLNFPDDLVIPVDQILSLPPHQVTIMCTGSQG
EPTSILGRLSLGTNRLFDIQKGDTVVLSSHPIPGNEENVYRVVNRLIARGASVIYEAIAP
VHVSGHASQEEMKLLLQLTRPKYFVPIHGELRHLVQHARLAREVGIPAENIQVIQNGMVL
EFENGEMRLSDEQVPVSHVFVDSAGVGDVDPELMREREALSRDGVVMVHLTMSKEFNAVV
YDPEIVTRGFLLPRDANELFAEMRRKIIQSASRANGNVRRVVEETVREYLYSETRRRPMV
YVTVSRSL
NT seq 1647 nt   +upstreamnt  +downstreamnt
atgagcaatggaatacttcgggtaattcctctgggcggcctgggggaagtaggccgcaat
ttgatggtgtacgaatacgataatgaaatactggtagtagatgcagggttgatgttccct
gaaaatgatatgctcgggattgattacatcattcctgatatgacctaccttgcccaaaac
cataccaaagtcaaggggattgtgattactcatgggcatgaagaccatattggcgctatt
catcatcttctagaccaggtcaatgccccaatttatgccactccactgacacgaggattg
ttggaagtaaaactgggtagaaatgggcatggtagtaaggcagatttgcgaaccgtgcaa
gccggtgaaaccgtacagattgggcccttccaggtagagttttaccatgtttgccattct
attcctgatggggttgggttgggcattctaacgccggctggcttaatcgtccattcggga
gactataagtttgatcatactcccgtggatggaaaatccacggattatgcaaagctggca
gaattttccaagcggggagtgcttgccctgctggccgattcaaccaatgccgaacgacct
ggttggacaccatctgagaaaaccattgacgctgcttttgatcaggtgttcagcgaagcc
aaagggcgaattatcattgcctcctttgcttctctgatctctcgcatgcaacaagccgcc
aatgctgctctgcgccatggaagaaagatcgctttcgtaggcgcgagcatgctcgataac
atgaaaatggcgcgtaaattgggatacttaaacttccccgatgatctggttatccctgta
gatcaaattctctccctgcctcctcatcaggtcactattatgtgcacaggttctcaggga
gagcccacttctattctggggaggctttcacttgggacaaatcgtctttttgatattcag
aaaggcgataccgtagtgttgtcctcccatcccattccagggaacgaagaaaacgtttat
cgggtggtcaaccgtttgattgcccgtggggcttctgtgatttatgaagccattgcaccg
gttcatgtgtctgggcatgcgagtcaagaagagatgaaattgcttttgcagttgacccgc
ccgaagtacttcgttcccattcatggcgaattacgtcatctggtacagcatgccaggctg
gcgcgagaagttggaattccggcagaaaacattcaggttatccagaatggtatggtgctg
gaattcgaaaatggcgaaatgcgcttgagcgatgagcaagttccagtctctcatgtattt
gtggatagtgccggggtaggcgatgttgaccctgaattaatgcgtgagcgcgaagcatta
tcccgggatggggtggtgatggtgcatttgaccatgtccaaagaattcaatgctgtggta
tatgatcccgaaatcgtgaccagaggttttctcctcccaagagatgccaatgaattgttt
gcggaaatgcgccgcaagatcattcaatctgcatcccgggctaatgggaatgtgcgccgt
gtagttgaagagacggtgagagagtatctatacagtgaaactcgacgtcgtcccatggtt
tacgtaaccgtttcaaggtccctgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (32)   

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