KEGG   Amborella trichopoda: 18424127
Entry
18424127          CDS       T02990                                 
Name
(RefSeq) transcription initiation factor IIF subunit beta
  KO
K03139  transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
atr  Amborella trichopoda
Pathway
atr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    18424127
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atr03021]
    18424127
Transcription machinery [BR:atr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIF
     18424127
SSDB
Motif
Pfam: TFIIF_beta TFIIF_beta_N Tau95
Other DBs
NCBI-GeneID: 18424127
NCBI-ProteinID: XP_006828784
UniProt: W1NLV6
Position
Unknown
AA seq 256 aa
MSDELISDNGTIDTAKADRSVWLMKCPQLVANAWQNHHDPSLPLAKVVVSVDPLQPDSPA
SLQFTMDLAATDSTNIPKSYSLNMFKDFVPMCVFSETNQGRVSVEGKVEHKFDMKPNSEN
MEQYGKLCRERTNKSMIKVRQMQMIDDDRGGLMRPMHGMLGFGSNSKDKKKILPIKGQEM
KRTRRDRGELEDIMFKLFERQPNWGLKQLIQETDQPSQFLKEILNELCIYNKRGPHQGTY
ELKPEYKKSAEEADAE
NT seq 771 nt   +upstreamnt  +downstreamnt
atgtctgatgaattaatctcggacaatggtaccatcgatacagccaaggccgatcgctct
gtgtggttgatgaagtgcccacaactcgtggctaatgcatggcagaatcaccatgatcct
tctctccctctcgccaaggttgttgtctctgttgatccacttcaacctgattctcctgct
tctctccagtttacgatggatttagctgcaacagattctacaaatataccaaagagttac
tctttgaatatgtttaaggactttgttcctatgtgtgttttttctgagacgaatcaagga
agggtgtcagtggaagggaaggtagaacataaatttgacatgaagcccaacagtgaaaac
atggagcagtatggcaaactatgccgtgagaggacaaacaaatctatgataaaagttaga
caaatgcagatgattgatgatgatcgggggggcttaatgaggcctatgcatgggatgctc
ggttttggatcaaattccaaggataagaagaaaattttaccaataaagggtcaagaaatg
aagagaactagaagagatcgtggcgaactcgaggatattatgttcaagctttttgaaaga
caaccaaactggggtctaaagcaacttatccaagagacagatcaaccttcgcaattcttg
aaggaaatacttaatgaactttgcatttacaacaagaggggacctcatcaaggaacttac
gagctcaagccggaatataagaaatcagcagaagaagcagatgcagaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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