KEGG   Amborella trichopoda: 18431778
Entry
18431778          CDS       T02990                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform
  KO
K11584  serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
atr  Amborella trichopoda
Pathway
atr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    18431778
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:atr01009]
    18431778
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atr03019]
    18431778
   03036 Chromosome and associated proteins [BR:atr03036]
    18431778
Protein phosphatases and associated proteins [BR:atr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     18431778
Messenger RNA biogenesis [BR:atr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     18431778
Chromosome and associated proteins [BR:atr03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     18431778
SSDB
Motif
Pfam: B56 Hit1_C Chlamy_scaf
Other DBs
NCBI-GeneID: 18431778
NCBI-ProteinID: XP_006841877
UniProt: W1P135
Position
Unknown
AA seq 489 aa
MIKQFLSKLPRKNPKPDSPTTFSSPLITEPSISGRRTSSAVFPANFDPLSSLKEAPASEK
QSLLISKLNLCTLISHSSNSQPLNETDQELRHQTLIEILDFVNLGSCKFNEQVMEALCNM
ISAHIFRVLPPSIRSSTVFSPQSAMDIDEDEPAMDPAWPYLQIVYDLLLKFVASSNTDPK
AVKKYLDHSFVFRLLELFDSEDPREREALKKILHRIYGKFMVHRPFIRKTVSNIFYRFVF
ETERHNGIAELLEVLGSIISGFALPLKEEHKMFLVRALIPLHKAKNIGAYLQQLSFSVIQ
FVEKEPKLAGTVITGLLKYWPATNSQKEVMFLGELEEVLEVTNGVEFQRIMVPLCRRIAL
CINSSHFQVAERALFLWNNEHIVSLIAQNRQVILTLVYQALERNTRSHWNQAVLNLTLNV
RKMFSEMDEELFQMFQSNYEEEEAKAKGVEEKRRLTWERLEAAAKSGPSDPAKNTAVLVT
PLIICTPLC
NT seq 1470 nt   +upstreamnt  +downstreamnt
atgattaagcaattcctcagcaaactccctagaaaaaaccctaaaccagattcacccacc
accttctcctccccactaatcacagagccctccatctcgggtcgacgcacttcctctgct
gtattccctgcaaattttgatcccctctcctctctcaaagaagctccagcttcagagaaa
cagtcactcctcatcagtaaactcaatctctgcaccctaatttctcactctagcaattca
caacccctcaatgaaactgatcaagaattgaggcaccaaaccctcattgaaatccttgat
tttgtcaacttgggttcctgtaaattcaatgaacaagtcatggaggccctctgtaacatg
atctcagctcatatttttagggtgttacctcctagcattcgaagcagtactgttttttca
cctcaatcagcaatggatattgacgaagatgagcctgccatggatccagcttggccctat
ctccaaattgtctatgatttgctattgaaattcgttgccagttccaacactgatccaaaa
gctgtgaagaagtacctggaccattcctttgtgtttcgattgctggagctctttgattct
gaagacccaagagagagagaggccttgaagaagattttgcatagaatttatgggaaattc
atggttcataggccatttataaggaaaacagtgagtaatatattttatcgatttgttttt
gaaacagagaggcataatgggatagctgagttgttagaggttcttgggagtataattagt
gggtttgctttgccattaaaggaagagcataagatgttcttagtaagagctttgatccca
cttcataaggctaaaaatattggggcttatcttcaacagttatcatttagtgtcattcag
ttcgtagagaaggagcccaaattagcagggaccgttataacggggttgttgaagtactgg
ccagccactaatagccaaaaggaagtgatgtttttgggggaattggaggaggttttagag
gtgacaaatggagttgagtttcagaggattatggtccccctttgtaggcgaatcgcattg
tgcatcaacagctcccactttcaagtggctgagcgagctcttttcttgtggaacaatgag
cacatcgtcagcttaattgctcagaaccggcaagttatcctaactcttgtctaccaggca
cttgaaaggaacacaagaagccattggaaccaggctgttctcaatctcactctaaatgta
aggaagatgttctctgagatggatgaggagcttttccaaatgttccagtctaattatgag
gaggaagaagcaaaggctaaaggggtggaggagaagcgtaggctaacatgggaacgctta
gaggcagctgccaaatctgggccttctgaccctgctaaaaacacagctgttttggtaacc
cctctaatcatttgcacccccctgtgctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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