KEGG   Amborella trichopoda: 18441557
Entry
18441557          CDS       T02990                                 
Name
(RefSeq) deoxyribodipyrimidine photo-lyase isoform X1
  KO
K01669  deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Organism
atr  Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:atr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:atr03400]
    18441557
Enzymes [BR:atr01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     18441557
DNA repair and recombination proteins [BR:atr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    18441557
 Prokaryotic type
    18441557
SSDB
Motif
Pfam: DNA_photolyase
Other DBs
NCBI-GeneID: 18441557
NCBI-ProteinID: XP_006851849
Position
Unknown
AA seq 568 aa
MYLCRISPLNLCYSRVLGLFIQASSLKVPLISSFCTSRLSSSSSMEPAKKSMKKRSEEGA
PSSNGRLLKKLKNKSGIGMESEPEDEETGVKVQSGRVRVLKAGETGGNGPVVYWMFRDQR
CNDNWALVYALEQGARLNVPVVVAFNLFDQFLGAKARQLGFMLRGLRDLEQSLKVLGVPF
FLFRGEADENIPKFTSQCNASLLVTDFSPLRIIQNIKENICHRVTEEIPVHEVDAHNIVP
VWVASDKLEYGARTIRTKINKLLPEYLTEFPDLKAPQIRWKDESPVEIDWENLIAEVLRK
GGAVPEVHWIEPGEQAALDMLMGSKNGFLSTRLKNYSTDRNNPSRPKGLSCLSPYLHFGQ
ISSQRCALEARKFRKLYSQSVDSFLEELIVRRELADNFCFYQPNYDSLQGAWEWARKTLR
DHAGDKREHIYTMEQLEKAKTADPLWNASQLEMVHYGKMHGFMRMYWAKKILEWTSGPEE
ALSIAIHLNDKYELDGRDPNGYVGCMWSICGIHDQGWRERSVFGKIRYMNYAGCKRKFDV
DGYIAYVKKLAAETKKRVPIKEIMEHNN
NT seq 1707 nt   +upstreamnt  +downstreamnt
atgtatttatgccggatatcgccattaaacttgtgttattctagggttttgggattgttc
atccaagcttcatcgctaaaggttccgttaatcagctcattttgtaccagtagattgagc
tccagttcttcaatggagcctgctaaaaaatccatgaaaaaaaggtcagaagaaggggcc
ccctcaagtaatggtagattgttgaagaaactgaaaaataagagtggaataggaatggaa
tcggaacctgaagatgaagaaactggggttaaggttcaatcagggagagttagagtgctt
aaagctggagaaactgggggtaatgggcctgttgtttactggatgttcagagatcagaga
tgtaacgataattgggctttggtttatgctttggagcaaggagctagattgaatgttcca
gtggttgtggcgtttaatttgtttgatcagtttttgggggcaaaagccaggcagttaggg
tttatgctcaggggtttaagagatcttgagcagagcctgaaggttttaggcgttccattt
tttctatttcggggagaagctgatgaaaatatccctaaattcacgagccaatgcaatgca
tcccttcttgtcacagatttctcgcccttacggatcattcaaaatataaaagagaatata
tgccatagggtaaccgaagaaattccagttcatgaagtggatgctcataacatagtacca
gtgtgggtggcctctgataaattggagtatggtgcaaggactataagaaccaagatcaac
aagcttctaccagagtacctcactgaattccctgatttgaaagccccccaaattagatgg
aaggatgaatctcctgttgaaatagattgggagaacctcatcgctgaagttctgaggaaa
ggtggtgcggttcctgaagtacactggattgaacctggtgaacaagcagcattggatatg
cttatgggtagcaaaaatggcttcctttcgacaagattgaaaaattattcaaccgatcga
aacaacccatcaagacctaagggcctttcgtgcctttctccttacttgcattttggtcaa
atctcttcacagcgctgcgctttggaggctcgtaaatttcgaaaattatattcccagtca
gtagattcgtttttggaagagctcattgtacgaagagaattggctgacaatttttgtttc
taccaaccaaattatgattcattacaaggagcatgggaatgggccagaaaaaccctaagg
gatcatgctggagacaagcgggagcatatctacacgatggagcagttagaaaaagcaaaa
acggcagatcctttatggaatgcgtctcagttagagatggttcactacggaaagatgcat
ggattcatgcggatgtattgggcaaagaaaatacttgaatggacaagtggacccgaggaa
gctctttcaattgcgatacatttgaatgacaagtatgaattagatggtcgagatccaaat
ggctatgttggctgtatgtggtcaatatgcggtattcatgaccagggatggcgagaaaga
tctgtgttcgggaaaatacgttacatgaattatgctggctgtaaaaggaaattcgacgtt
gatggctacatagcttatgtgaagaaacttgcagcggagacaaagaaaagggttccaatt
aaggaaatcatggaacataacaactag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (32)   

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