KEGG   Amborella trichopoda: 18443031
Entry
18443031          CDS       T02990                                 
Name
(RefSeq) twinkle homolog protein, chloroplastic/mitochondrial
  KO
K17680  twinkle protein [EC:5.6.2.3]
Organism
atr  Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:atr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:atr03029]
    18443031
Enzymes [BR:atr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     18443031
Mitochondrial biogenesis [BR:atr03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Mitochondrial DNA maintenance factors
    18443031
SSDB
Motif
Pfam: Toprim_4 DnaB_C Toprim Toprim_2 AAA_25 Stc1 Helic-prim_T7_N AAA_29 ATPase_2
Other DBs
NCBI-GeneID: 18443031
NCBI-ProteinID: XP_006853301
UniProt: U5D333
Position
Unknown
AA seq 701 aa
MLLSRRVSVVAAMGSKHFLSNPQVSPGSSRLLFFCLIRPLHTGSSAGLLFGNPTKPISTL
RLVSLKRPRLASLRPVMIKRAVHVERQEVDNVVPERLSLLREKLKNEGIICDSCTPGQYS
NMLCPKCEGGSTRERSFSLFIREDGSMALWTCFRGKCGWRGHIQASSNASYAPAERNEKK
QINGDLNSKKKPSRVLTEKSLGLEPLCPEILAYFSERMISPETLRRNGVMQRKMSDQNVI
AFPYRRDGRIVNCKYRDIEKNFFQERDTERVLYGLDDIKNASDIIIVEGEMDKLSMEEVG
YLNCVSVPDGAPAKVSEKELPPIEKDTKYQFLWKYKEYFQKASRIILATDADVPGQSLAE
ELARRVGRERCWRVSWPKKNEIEVCKDANEVLMHLGPQALRDVIENAELYPIRGLFRFDD
YFDEIDAYYHRILGNELGVSTGWRSLDDLYNVVPGELTIVTGVPNSGKSEWIDALICNIN
AREGWTFALCSMENKVREHARKLLEKHIKKPFFENSRYGDSIPRMSRDELREGKQWLSDT
FHLIRYEDDSLPSIKWVIDLAKAAVLRYGVRGLVIDPYNELDHQRPPNQTETEYVSQMLT
LVKRFAQHHQCHVWFVAHPRQLQNWNGGAPNLYDISGSAHFINKCDNGIVVHRNRDPDAG
PLDRVQICVRKVRNKVSGNIGDAFLSYRRTTGEFKDVVEGH
NT seq 2106 nt   +upstreamnt  +downstreamnt
atgcttctctctcgtagagtttccgttgttgcagcaatgggcagcaagcatttcctcagt
aacccacaggtttctccagggtcttcccgtcttctctttttctgtctaatccgcccattg
cacacaggttcatctgctgggcttctctttggaaacccaacaaaacccatatccactttg
cgtcttgtttccctgaaaaggcccagacttgcttcattaaggcctgtaatgatcaaaaga
gcagttcatgtggaacgacaggaagtggataatgttgtacctgagcgactatccttactg
agagagaagcttaaaaatgaagggataatttgtgactcatgtactcctggtcaatactct
aatatgttatgcccaaagtgtgaaggtgggtccacgagggaaagaagcttttctcttttc
attcgtgaagatggatctatggctttatggacttgttttagaggtaaatgtggatggagg
ggtcacatacaagcctcttctaatgcatcatatgctccagctgaaagaaatgaaaagaaa
caaatcaacggagatttgaactccaaaaagaaaccctccagggtgctaacggaaaagagc
cttgggctggaacctttgtgtcctgagatacttgcgtacttctctgagcggatgatatca
ccagaaaccttgagaagaaatggggtcatgcagcgtaaaatgagcgatcagaatgtgatt
gcgtttccctatagaagggatggtaggattgtcaactgcaaataccgtgacattgagaaa
aatttttttcaggaaagggatacggagagagtgttgtatggactagatgatataaagaat
gcaagtgatattatcattgttgagggcgaaatggataaactatccatggaagaagttggt
tacctgaactgtgtgagtgtccctgatggtgcccctgctaaggtctcagagaaagagttg
ccacctatagaaaaggatacaaaataccaatttttgtggaaatacaaggagtatttccaa
aaggcatctcgtataatcctagccactgatgctgatgtgccaggccagtctttagctgaa
gagcttgcacggcgtgtcggtagagaaaggtgttggcgggtcagctggccaaagaaaaat
gaaatcgaggtttgcaaggatgcaaatgaggtgctaatgcacttaggccctcaagcactc
agagatgttattgagaacgctgagttgtatcccattagaggcctctttcggtttgatgac
tacttcgatgaaattgacgcatactatcatcgaattctgggaaatgagcttggtgtttca
actggatggagatctctagatgacttgtacaatgttgtccctggagaattaaccatagtg
actggggttcctaattcggggaagagtgaatggattgatgctctcatatgcaatatcaat
gcacgcgaaggttggacatttgcactttgttcaatggagaacaaggttcgggagcatgca
aggaaactcttggagaaacacattaagaaaccattcttcgaaaattctagatatggcgac
tctattccaagaatgagccgtgacgaattaagagaagggaagcaatggctgagtgatacc
ttccatctcataaggtatgaagatgatagtcttccatccatcaaatgggttattgatctt
gccaaagctgcagtcctgagatatggggtacggggacttgtgattgatccatacaacgaa
cttgatcatcaaagacctcccaatcaaacagagacagagtatgtgagccaaatgcttacc
ttggttaaacgttttgctcagcaccatcaatgccatgtatggtttgttgctcatccacgg
cagctacaaaactggaatggtggtgcgcctaatctctatgacatcagtgggagtgctcat
tttataaacaagtgtgacaatggcattgttgttcatcgtaatagggacccagatgcagga
cctctagatcgagtgcagatatgtgtgcgaaaggtgcggaacaaggtcagtgggaatatt
ggggatgcctttttgtcatatagaaggaccactggtgagtttaaagacgtcgttgaaggc
cattaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (50)   
   KEGG ORTHOLOGY (1)   
   RefGene (46)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (67)   

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