KEGG   Amborella trichopoda: 18446878
Entry
18446878          CDS       T02990                                 
Name
(RefSeq) DNA-directed RNA polymerase 1B, mitochondrial isoform X1
  KO
K10908  DNA-directed RNA polymerase, mitochondrial [EC:2.7.7.6]
Organism
atr  Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:atr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:atr03029]
    18446878
Enzymes [BR:atr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     18446878
Mitochondrial biogenesis [BR:atr03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial RNA polymerase
    18446878
SSDB
Motif
Pfam: RNA_pol RPOL_N TIMELESS_C
Other DBs
NCBI-GeneID: 18446878
NCBI-ProteinID: XP_006857036
UniProt: U5DDL3
Position
Unknown
AA seq 987 aa
MWRSSAWHLSSLRNSMTKPILFPYRVSMPKQSSTIFSSSSSSPPSSSPEFEPSSINRVFQ
ISFSQLGTRQCPQLFDKIEDPILTLDSTIDDTVNVPWIASQISEILPIQTPQAWSSFYAS
DSHIKNITDEAIDGELKKKGSREMSKTKFNGLRRRQVKIETEAWERAVREYRELISEMCE
QKLAPNLPYMKSLFLGWFEPLRDAIAEEQALQETKRAKTGYAPYIGLLTADKMAVIVMHK
LMGLMMTGQDCGSVRVVQAACQIGEAVEHEARIHDFLEKTKKKSRRGKKVGEESESLSKE
QENLRKRVTNLMKMQKLREVRKLVRQGDDVKPWGQDAHAKLGSRLIELFIKTAYIQPPVD
QQAEGPPEIRPAFRHTFRTFTKDRQKFCRRYGVIECDPLVHKGLDKTARHMVTAYTPMLI
RPKPWRGYDKGGYLVLPSQIMRIHGAKQQREAVKNVPQKQLQNVFEALDTLGSTKWRVNK
RILDVVNRVWARGGGIAGLVDREDVLLPEKPDTEDEMEIRKWRWSVKKAKKVNSERHSQR
CDLELKLSVARKMREEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGK
SGLRWSKIHLANLYACGVDKLSYDGRLAFVENHLDDIFDSAERPLEGKRWWLNAEDPFQC
LAACMNLFEALKSPTPENVISHMPVHQDGSCNGLQHYAALGRDRLGAAAVNLVAGEKPAD
VYSGIAARVLEIMKRDSEKGPASNPNAFLARALVDQVDRKLVKQTVMTSVYGVTYIGARD
QICRRLKERGHITDDSQLFRASCYAAKVTLTALGETFQAARNIMSWLGDCAKVIASENEP
VRWTTPLGLPVVQPYRKFARHLVKTSLQVLALQRESNSVMVKRQRTAFAPNFVHSLDGSH
MMMTAIACKKIGLNFAGVHDSYWTHACDVDEMNWILREKFVELYSMPILENLLEGFQTSF
PTLVFPAVPERGDFDLRDVLESPYFFN
NT seq 2964 nt   +upstreamnt  +downstreamnt
atgtggagaagttcagcatggcatctctcatcccttcgaaattcgatgacgaaacccatc
ttattcccatatcgagtctcgatgcccaagcagagcagcacaattttctcctcttcttct
tcttctcctccttcttcttcacctgaatttgagccctcctccattaatagagtcttccaa
ataagcttttctcaattgggtactcgtcaatgtcctcaattatttgataaaatagaagat
cctattctcactctagattccaccattgatgacactgtgaacgttccatggattgcaagc
caaataagcgagattttacccattcaaacgccccaagcttggtcctctttctatgcctct
gattcccacataaagaacattacggatgaggctattgatggagagttgaagaaaaagggt
tcaagagaaatgagtaagaccaagttcaatggcctaagaagaaggcaggttaaaattgag
acagaggcttgggaacgagcagtgagagagtatcgagagcttatttcagaaatgtgcgag
caaaaattggcacctaacttgccatatatgaagtccctctttcttggatggtttgaacct
ctgagagatgccattgctgaagagcaagctttacaggaaacaaagagggctaagaccggt
tatgctccctatattggactactaaccgctgataaaatggcagttattgtgatgcataag
ttgatgggtttgatgatgactggtcaggattgtggaagtgttcgtgttgttcaggctgct
tgtcaaattggagaggccgtcgagcatgaggctagaatacatgactttttggaaaagact
aagaagaaatctcgaagagggaagaaggttggggaggaatcagagagtttaagcaaagag
caggaaaatcttaggaaacgagtcacaaatttaatgaaaatgcaaaaactgcgtgaagtg
agaaagctagtcagacaaggggatgatgtgaagccctggggtcaggatgctcatgctaag
ttgggaagtcgtcttatagagttattcataaaaacagcttatatacagcctcctgttgat
caacaagcagagggccctcctgaaattaggcctgcatttaggcatacgttcagaactttc
acaaaggatcggcagaaattttgcaggagatatggagtcatagaatgtgatccgctcgtg
cataaagggctagataaaacagctaggcacatggtgacagcttatactccaatgctgata
cgaccaaaaccttggagagggtatgacaagggaggatacttggttttgccttctcagata
atgcggattcatggggccaagcaacaacgcgaggcggtcaagaatgttccacagaagcag
ttgcaaaatgtttttgaggcactggatactctgggtagcaccaaatggagggtgaataaa
agaattcttgatgtggtaaatagagtttgggctcgcggaggtggaattgcaggtttggta
gaccgagaagatgttctccttcctgagaaaccggacacagaggatgaaatggaaattcgg
aagtggcgatggagtgtcaaaaaggcaaaaaaggtcaacagtgagaggcattctcagcga
tgtgatttggaacttaaactttctgttgctagaaaaatgagggaagaagaaggattctat
tatccccataatcttgatttccgtggccgagcttatcctatgcatcctcaccttaaccat
cttgggtcagacctttgccgagggattttagagttcgctgagggaagaccgttgggaaag
agtggattgcgttggtcgaagatacatctcgcaaatctttatgcatgtggtgtagataaa
ctctcatatgatggtcgattagcatttgtcgagaaccacttagatgatatatttgattcg
gcagagagacctcttgaaggaaaacggtggtggttaaatgcagaagatcccttccaatgc
ttagccgcatgtatgaatctttttgaagcattgaaaagtcccactcctgagaatgttatc
tctcacatgccagtccatcaggatggttcatgtaatggtttgcagcactatgcagctctc
ggaagagatcgattgggggcagctgccgtcaacttagttgctggtgagaaaccagcggat
gtttattctggtatagctgccagggtactggagattatgaaaagggactcagagaaaggt
cctgcttccaatccgaacgcctttcttgctagagccttggttgaccaggtggaccggaaa
ttggtaaagcaaacagtgatgacatcagtgtacggcgtcacttacataggtgcacgtgac
caaatttgtaggaggctaaaagagcggggccacataacagatgactcacagttattcaga
gcgtcctgctatgctgccaaagtaacattgactgctctaggggagacgtttcaagcagca
cgaaatattatgagctggctgggtgactgtgcaaaggtgattgcttcagaaaatgaacca
gtgagatggaccactcctcttgggcttccagttgtgcagccttatcggaaatttgcaagg
catctagttaaaacatcccttcaggtgttggcattacaacgagagagtaactcggttatg
gtgaaacggcaaagaacagcttttgcaccaaattttgttcattcccttgatggctctcac
atgatgatgaccgccattgcatgcaaaaagattggcttgaattttgcaggggtgcatgac
tcatattggacacatgcatgtgatgtcgatgagatgaactggattcttcgggagaagttt
gttgaactctacagcatgccaatacttgagaatttgctcgagggctttcaaacatcattt
cccacattggtgtttccagctgtccctgaaaggggagattttgatctccgagatgtcctt
gaatccccatattttttcaactga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

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