KEGG   Aegilops tauschii (wheat D): 109758889
Entry
109758889         CDS       T04345                                 
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109758889
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ats03019]
    109758889
Messenger RNA biogenesis [BR:ats03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     109758889
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     109758889
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 109758889
NCBI-ProteinID: XP_020173337
Position
Unknown
AA seq 294 aa
MSAPPPPASSDDDGKPGDEEGVEIREVWANNLEAEFAVIRDVVDDYPYIAMDTEFPGIVC
RPLGSFRSNDEYNYATLKANVDMLSLIQLGLTLSDENGALPARGTGGRPCAWQFNFRGFD
PRSDPANADSIDLLRNSGIDFDHFTTEGADTGHFAELLMSSGVLLNAELQWVTFHSGYDF
GYLLKLLTGRNLPDTMPGFFDLIRIYFPVLYDIKHLMKYCGSLHGGLSKLGELLGVQRVG
ICHQAGSDSLLTLRCFKKLKEAYFRGSTENYAGVLYGLISDGGENRPPAALLIE
NT seq 885 nt   +upstreamnt  +downstreamnt
atgtctgcccctccgccacccgcctcctccgatgatgatggtaagcccggcgacgaggag
ggcgtagagatccgcgaggtatgggcgaacaacctcgaggcggagttcgccgtgatccgt
gacgtcgtcgacgattacccgtacatcgccatggacaccgagttcccgggcatcgtgtgc
cgcccgctcgggagctttcgctccaatgacgagtacaactacgccaccctcaaggccaac
gtcgacatgctgagcctcatccagcttggtctcaccctctccgacgagaacggcgcactc
ccggccaggggcacgggggggcgcccctgcgcctggcagttcaactttcggggtttcgat
ccgcgctcagaccccgccaacgctgactccatcgacctgctacgcaacagcgggatcgac
ttcgaccacttcaccaccgagggtgctgacacaggccacttcgccgagctgctcatgtcg
tcgggcgtcctgctcaacgctgagctccagtgggtcacattccacagcgggtacgacttc
gggtacctgctcaagctgctaaccgggcggaacctacccgacaccatgcctggattcttt
gacctcatcagaatctacttccctgtgctgtacgacatcaagcatctcatgaagtactgc
ggcagcctccatggtggcttgagcaagcttggtgagctacttggtgtccaacgtgtgggg
atctgccaccaggctgggtctgactcgctgctgaccttgcggtgcttcaaaaagctgaag
gaggcatatttcagaggatcgaccgagaattatgccggtgtattgtatggtcttatttct
gatggtggggagaacagaccaccagcagctctgctcatcgaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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