KEGG   Aegilops tauschii (wheat D): 109759696
Entry
109759696         CDS       T04345                                 
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1 isoform X1
  KO
K14442  ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109759696
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ats03019]
    109759696
Enzymes [BR:ats01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     109759696
Messenger RNA biogenesis [BR:ats03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     109759696
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C HA2_C DEAD HA2_N AAA_22 nSTAND3 T2SSE BEX AAA_19 ABC_tran Rad17 NACHT
Other DBs
NCBI-GeneID: 109759696
NCBI-ProteinID: XP_020174118
Position
Unknown
AA seq 1052 aa
MLLHSSGCRGSLLFRSGFPFPATTTRRNLRALTTAAATPNMYRGGRGGGTNSQRGRGRGR
GGGGRGGRGGGGGGRGEQRWWDPQWRAERLRQMASEVEKVDEHEWWNTIGQLREGSQQEL
VVKKNFGRDGQNTLAHIAQRHGLYFNAYNKGKTLVFSKVPLPDYRADLDERHGSSQNEIK
MSNETERRVENLLSRAQSNNNASASTSTVSMRQSLPSTSTAVAESTTYVDKQKLSFQLRD
MQRSKKMMPSARSMQSFREKLPAFKAREEFLKAVAANQVLVISGETGCGKTTQLPQFILE
EEIDNLRGADCSIICTQPRRISAISVAARVGSERGEELGETVGYQIRLESKRSTQTRLLF
CTTGVLLRKLVQEPDLVGVSHLLVDEIHERGMNEDFLIIILRDLLPRRPDLRLVLMSATI
NAELFSKYFGDAPIMHIPGFTFPVAELFLEDILEKTQYKIKSERDNFQGNSRKKRLASVK
NDPLADVFQDVDINKEYGNYSITTRQSLEAWSVTELDLSLVEGTIEYICRHEGEGAILVF
LTGWDEISKLLDKIKGNNLLGNSNKFLVLPLHGSMPTVNQREIFDRAPANMRKIVLATNI
AESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYR
LYPKVIHDAMPQFQLPEILRTPLQELCLTIKSLQLGAVASFLAKSLQPPDPLSVKNAIEL
LKTIGALDDLEELTYLGRHLCTLPLDPNIGKMLLIGSVFQCLDPALTIAAALAYRNPFVL
PIDRKEEADAVKRSFAGDSCSDHIALLKAFEAWKEAKRSGRERSFCWENFLSPMTLKMMD
DMRNQFFDLLSDIGFVSKTRGVKVCNPRSLLHSIISITITSVLKFQAYNHYGKDLEMVSA
VLCAGLYPNVIQCKRRGKRTAFYTKDVGKVDIHPSSVNAGVQQFPLPYLVYSEKVKTASI
YVRDSTNISDYALLLFGGSLSPSNTGEGIEMLAGYLHFSAPKRIIELIQRLRGELDKLLQ
RKIEEPALDIFSEGKGVVAAAIELLHSQNIYH
NT seq 3159 nt   +upstreamnt  +downstreamnt
atgctcctccactcttccggttgccgcggcagtctcctgttccgcagcggcttccccttc
ccggccaccaccacccgcagaaacctaagggcgctcacaaccgcagcagctactcccaac
atgtatcgcggcgggcgcggcggcggcaccaactcccagcgtggtcgcgggcgcgggcgc
ggcggcggaggcagaggaggccgtggcggcggcggcgggggccgtggtgagcagagatgg
tgggatccgcagtggcgcgccgagcggctgcggcagatggcctcagaggtggaaaaggtt
gatgagcatgagtggtggaatacgattgggcaattaagagaaggatctcagcaggagtta
gtagtcaagaagaatttcggacgtgatggacagaatacacttgcacatattgctcagaga
cacggcctttacttcaatgcatacaacaaagggaagacacttgtttttagcaaagtgcca
ctgcctgattaccgagcagatcttgatgagaggcatggatcatcacaaaacgagattaag
atgtccaatgagacagagagacgagtggaaaaccttttatccagggcacagtcaaataac
aatgcttctgctagcacatccactgtctcaatgaggcaatctttgcccagcacatccacg
gcagtagctgaatcaacaacatatgttgataaacagaagctaagttttcagcttagggat
atgcagagatcaaaaaagatgatgccaagtgctagatcaatgcagtctttcagggaaaaa
ttaccagcattcaaagcgagagaggagtttttgaaagcagtagcagctaatcaggttttg
gtcatatctggtgagacaggttgtggtaaaacaacacagcttccgcagttcatactagaa
gaggagatagataaccttcgtggtgctgattgcagcataatatgtactcaaccccgccgt
atatctgccatatcggttgcagcacgtgtaggatctgagagaggtgaagagcttggtgag
actgttggataccagattcgccttgaatcaaaacgttccacacaaacacgactgctcttc
tgcacgacaggagttttgcttagaaaactggttcaggagccagacttagttggtgtaagt
catttactagttgacgaaattcatgaacgtggcatgaatgaagattttctcatcatcatt
ttacgcgaccttctgccaaggcgtcctgaccttcgtcttgtattgatgagtgcaacaata
aatgctgaactattttccaaatactttggagatgccccaattatgcatattccgggtttc
acttttcctgttgccgagttatttctggaagatattttggaaaagacccaatacaaaatc
aagtctgaacgtgataattttcaaggaaattcaagaaaaaagagacttgcttcagttaag
aatgatccattggctgatgttttccaggatgtcgacattaataaggagtacggaaactat
agcattacaacaaggcagtcccttgaagcttggtctgtcactgaactggatttgagcctt
gtggaaggtacgattgagtatatctgtcgtcatgaaggagaaggtgcaatccttgtattc
cttactggttgggacgaaatttcaaaacttttggacaagattaaagggaataatctgctt
ggcaattccaataagttcctagttctcccactgcatggctctatgccaactgttaatcag
cgtgaaatttttgacagagcaccagctaatatgagaaaaattgttctggcaacaaatatt
gcagaaagcagtattacaatagatgatgttgtgtatgtaattgattgtggtaaagcgaag
gagacaagttatgatgccttgaataagctagcgtgccttctaccatcgtggatatcaaaa
gcctctgctcatcagaggcgaggccgtgcaggccgtgttcagccaggtgtttgctatagg
ttgtacccgaaagtcattcatgatgccatgcctcagtttcagctgcctgaaattcttagg
actccactgcaagaactgtgccttactatcaaaagcttacagcttggagcagtcgcttct
ttcttagccaagtcactgcaacccccagatccgctttctgttaagaatgcgattgagctt
ctgaaaaccattggagcgctggatgatttggaggagctcacttatttaggacgacatcta
tgtacactaccactggatccaaacattggaaagatgctgctcattggatccgtcttccag
tgcctggatcctgcattaacaatcgctgctgctcttgcttatcgtaatccatttgtgctc
ccaatagatagaaaagaagaagcagatgctgtcaaaagatcatttgctggtgactcctgc
agtgatcacattgcccttcttaaggcatttgaagcatggaaggaagcaaaacgcagtgga
agggagcgttctttctgttgggaaaattttctgtctcctatgaccctgaagatgatggat
gacatgcgaaatcaattttttgatctactttctgatattggatttgttagcaagacaaga
ggagtgaaggtttgtaaccctagatctctcttgcattccataatttccattacgattact
tccgtgctaaaatttcaggcatataaccattatggcaaggatctggagatggtttccgct
gttttatgtgctgggctttacccaaatgtcatacagtgcaaaagacggggcaagaggaca
gcattctacaccaaagatgtcggaaaggtggacattcacccatcatcagtcaatgcagga
gtgcagcaattcccattgccttatctggtttacagcgagaaggtgaaaactgctagcatt
tatgtgagggactccacaaacatatcagattatgctcttctactttttggtggttcctta
agtccaagtaacaccggagaaggcatcgagatgcttgcggggtatcttcatttctctgca
ccaaagcgtatcatagagttgatccagagattaagaggtgaattggacaaactccttcag
aggaagattgaggaacctgcacttgacatcttttcggaagggaaaggggttgtggctgcg
gccatagaactgttgcacagtcaaaacatttaccactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (13)   
   Pfam (13)   
All databases (32)   

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