KEGG A.tumefaciens: Atu0830

Agrobacterium tumefaciens C58: Atu0830

Entry

Atu0830 CDS A.tumefaciens

Gene name betA

Definition choline dehydrogenase

Orthology K00108 choline dehydrogenase [EC:1.1.99.1]

Pathway atu00260 Glycine, serine and threonine metabolism

Class Metabolism; Amino Acid Metabolism; Glycine, serine and threonine
metabolism [PATH:atu00260]

SSDB

Motif Pfam: GMC_oxred_N GMC_oxred_C DAO FAD_binding_2 Pyr_redox_2
Lycopene_cycl Thi4
PROSITE: GMC_OXRED_1 GMC_OXRED_2

Other DBs NCBI-GI: 159184484
NCBI-GeneID: 1132868
UWash: Atu0830
UniProt: Q8UH55

Position 828964..830613

AA seq 549 aa
MQADYVIVGSGSAGSAIAYRLSEDGRYSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNW
GYLSEPEPNLDNRRITAPRGKVIGGSSSINGLVYVRGHAEDFNRWEELGAQGWAYADVLP
YFKRMEHSHGGEEGWRGTDGPLHVQRGPVSNPLFHAFIQAGAQAGFELTDDYNGSKQEGF
GLMEQTIHNGRRWSAANAYLKPALKRGNVTLVNGFARKVIIENGRAVGVEIERRGRVETV
KANREVIVSASSFNSPKLLMLSGIGPAAHLKDMGIEVKADRPGVGANLQDHMEFYFQQVS
TKPVSLYSWLPWFWQGVAGAQWLLSKGGLGASNQFEACAFLRSAPGLKQPDIQYHFLPVA
ISYDGKAAAKSHGFQAHVGYNLSKSRGNVTLRSADPHDDPVIRFNYMSHPEDWEKFRHCV
RLTREIFGQKAFDDFRGPEIQPGENIETDEQIDAFLREHLESAYHPCGTCRMGDRNDPMA
VVDPECRVIGVEGLRVADSSIFPHVTYGNLNGPSIMTGEKAADHILGKTPLPRSNQEPWV
NPRAAVSDR

NT seq 1650 nt +upstreamnt +downstreamnt
atgcaagcagattacgtcatcgtcggctccggctctgcgggctccgccatcgcctaccgc
ctgtcggaagacggccgttattctgtcatcgtcatcgaagctggcggttcggatttcggc
cccttcatccagatgccggcggcacttgcctggccgatgagcatgaagcgctacaattgg
ggttatctctccgagcccgagcccaatcttgacaaccgccgcatcactgcgccgcgcggc
aaggtcatcggcggctcgtcctccattaacggccttgtttacgttcgcggccatgccgag
gatttcaaccgctgggaggagcttggcgcgcagggctgggcctatgcggatgtgctgccc
tatttcaagcgaatggaacacagccacggcggcgaggaaggctggcgcggcacggatggg
ccgctgcatgtgcagcgcgggccggtcagcaatccgctgttccacgccttcattcaggcg
ggcgcacaggcgggctttgaactgacggacgactataacggctccaaacaggaaggtttc
ggcctgatggagcagactatccacaatggccgccgctggtccgccgccaatgcctatctt
aaaccggcgctgaaacgcggcaacgtcacgctggtcaatgggtttgcccgcaaggtcatc
atcgagaatggccgtgccgtcggcgtcgagatcgagcgcaggggtcgggttgaaaccgta
aaggccaatcgcgaggtcatcgtttcggcctcctccttcaactcgccgaaactgctgatg
ctctcaggcatcggccccgccgcgcatctgaaagacatgggcatcgaggtgaaggcggat
cgtcccggtgtcggggccaatcttcaggaccatatggagttttatttccagcaagtctcc
accaagccggtctcgctttattcatggctgccatggttctggcagggggttgccggtgca
caatggctgctgtcgaaaggcgggctcggtgcctccaaccagttcgaggcctgcgccttc
ctgcgctccgcacccggtctgaaacagcctgacatccagtatcatttcctgcccgtcgcc
atctcttatgacggcaaggcggcggcgaaaagccatggctttcaggcgcatgtcggttac
aacctgtcgaaatcgcgcggcaacgtcaccctgcgctccgccgatccgcatgacgacccg
gtaatccgcttcaactacatgagccacccggaagactgggaaaaattccgccattgcgtg
cgcctgacgcgcgagattttcggccagaaagccttcgacgattttcgcgggccggaaatc
cagccgggtgaaaacatcgagacggacgaacagatcgacgcctttttgcgcgagcatctg
gaaagcgcctatcacccctgcggcacctgccggatgggagaccgcaacgaccccatggcg
gtcgtcgatccggaatgccgggtgatcggcgtggaggggctgcgggtcgccgacagctcg
atcttcccgcatgtgacctacggcaacctcaacggcccgtcgatcatgaccggcgaaaaa
gcggctgatcacatccttggcaaaaccccgctgccccgctccaatcaggagccgtgggta
aacccgcgtgcggccgtcagcgaccgctga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   UWASH (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (7)   
   PROSITE (2)   
All databases (21)

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