KEGG T00070: Atu0840

Agrobacterium tumefaciens C58: Atu0840

Entry

Atu0840 CDS T00070

Definition

ATP-dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

atu Agrobacterium tumefaciens C58

Pathway

atu03410	Base excision repair
atu03420	Nucleotide excision repair
atu03430	Mismatch repair
atu03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:atu03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:atu03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:atu03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:atu03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_A_N Se-cys_synth_N

Other DBs

NCBI-GI:

159184491

NCBI-GeneID:

1132878

UniProt:

Q7D0K1

Position

839733..841358

AA seq 541 aa
MKAFATLLDRLVLTPSRNGKLKLLTDYFRDTPDPDRGYGLAAIAGTLDLKSVKPAMLREL
VMERMDEVLFRYSYDYVGDLAETISLVWGNIGGVDDAEAQDPRLGEVVTLMNSLGRTEVR
GAVRDLLDRLDTSSRFAFLKLATGSLRIGVSARLARQALADFADKDITEIETLWHGLTPP
YTTLFSWLEGNSDRPLLATPAIFHSVMLATPVADGDLDALDPADYAAEWKWDGIRVQLSR
AGETRKLYSRSGDDISGAFPDVLDAIEFEGVMDGELLVGGTARSNNLTRTFSDLQQRLNR
KTVTAKMRDDYPAFIRAYDLLFEGESDIRAQTYLERRNRLSDIIERAPHDRFDLSPLIGF
SSWSELDTLRAAPPDPVIEGVMIKRRDSTYQAGRAKGPWFKWKRDPYNIDAVMMYAQRGH
GKRSSYYSDFTFGVWAEGEDGEQLVPVGKAYFGFTDAELEVLDKFVRDNTVERFGPVRAV
RATPDFGFVLEVAFEGINRSTRHKSGVAMRFPRIARLRADKLPAEADRLSTLVAMIDGVE
G

NT seq 1626 nt +upstreamnt +downstreamnt
atgaaagccttcgccacccttctcgaccgccttgtcctcacgccgtcgcgcaacggcaag
ctgaagctgctcaccgattatttccgcgatacgcccgatcccgaccggggctacgggttg
gcggccattgccggcacgctggacctcaaaagcgttaaaccggccatgctgcgcgagctg
gttatggagcgcatggacgaggtgctgttccgttattcctacgattatgtcggcgatctg
gccgagaccatttcgctggtctggggcaatatcggcggcgtggatgatgcggaggcgcag
gatccgcgcctcggcgaagtcgtgacgctgatgaactcgctggggcgtaccgaggtgcgc
ggcgcggtgcgcgatctgcttgaccggctcgatacctcctcccgtttcgctttcctcaaa
ctcgccaccggcagcctgcgtatcggcgtttcggcgcggctggcgcggcaggcgctggcg
gatttcgcggataaggacatcactgaaatcgagaccctttggcatggtctgacgcccccc
tacaccacgctattctcctggctggagggcaactccgaccgcccgctgctggcaacgccc
gccatcttccattcggtgatgctggcgacaccggtcgccgatggcgatctcgatgcgctg
gatcccgccgactatgcagcagagtggaaatgggacggtatccgtgtgcaattgtcccgg
gccggcgaaacgcgaaagctctattcccgctccggcgacgatatttccggtgctttcccg
gatgtgcttgacgccatcgaattcgaaggcgtgatggatggcgaattgctggtcggtggc
accgcgcgatccaacaatctcacccgcaccttctcggatttgcagcagcggctgaaccgc
aagacggtaacggcgaagatgcgggatgactatcccgctttcatccgcgcttatgacctg
ctgttcgagggcgagagcgacattcgcgcgcaaacctacctggagcgccgcaaccggctg
tctgacatcatcgagcgcgcgccgcatgatcgcttcgacctctcgccgttgatcggcttc
tccagctggtcggaactcgacactttgcgcgccgcaccgcccgatcctgtcatcgaaggg
gtgatgatcaagcgccgcgacagcacctatcaggccgggcgcgccaaggggccctggttc
aagtggaaacgcgatccctacaatatcgacgccgttatgatgtatgcccagcgtggccac
ggcaaaagatcgagctattattccgatttcaccttcggtgtctgggcggaaggcgaggat
ggtgaacagctcgtgcctgtcggaaaggcctatttcggtttcaccgatgccgaactggaa
gtgctggacaagttcgtgcgcgacaatacggtcgagcgtttcggcccggtgcgggcggtg
cgcgccacaccggatttcggtttcgtgctggaggtggccttcgaaggcatcaaccgctcc
acccgccacaagtcaggcgttgccatgcggtttccgcgtattgcaaggttgcgcgccgac
aagctgccagccgaggccgacaggctctcgacgctggtggcgatgatcgatggtgtggaa
ggttag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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