KEGG A.tumefaciens: Atu2247

Agrobacterium tumefaciens C58: Atu2247

Entry

Atu2247 CDS A.tumefaciens

Gene name hemF

Definition coproporphyrinogen III oxidase (EC:1.3.3.3)

Orthology K00228 coproporphyrinogen III oxidase [EC:1.3.3.3]

Pathway atu00860 Porphyrin and chlorophyll metabolism
atu01100 Metabolic pathways

Class Metabolism; Metabolism of Cofactors and Vitamins; Porphyrin and
chlorophyll metabolism [PATH:atu00860]

SSDB

Motif Pfam: Coprogen_oxidas
PROSITE: COPROGEN_OXIDASE

Other DBs NCBI-GI: 15889523
NCBI-GeneID: 1134285
UWash: Atu2247
UniProt: Q8UD80

Position 2219983..2220894

AA seq 303 aa
MERPILPKGLPEDIEDKKAVAQAWFQHLRDTIVASFETLEDELTGPLSDQEPGRFVQKDW
LRDNGEGGGGKMSMMEGRVFEKVGVHTSTVYGEFSPEFRKQIPGAEEDPRFWASGLSLIA
HPVNPNVPAVHMNTRMVVTTSHWFGGGADLTPVLGRRRTQQDPDTQLFHRAFEITCNRHP
IADYPRYKSWCDEYFFLKHRDEPRGTGGIFFDWLHPDEEKGGWDANFTFVQDVGRAFNLV
YPKIVRANFNQNWTEEDRDEQLIRRGRYVEFNLLYDRGTIFGLKTGGNVESILSSLPPVV
RWP

NT seq 912 nt +upstreamnt +downstreamnt
atggaacggccaatcttgccgaagggcttgcccgaggacattgaagacaagaaggccgtt
gcccaggcgtggttccagcatctgcgcgacaccatcgtcgcctccttcgaaaccctagaa
gacgaactcactggcccgctttccgatcaggagcctggtcgcttcgtgcagaaggactgg
ctgcgcgacaatggcgagggcggcggcggcaagatgtcgatgatggaaggtcgcgtcttc
gaaaaggtcggcgtgcacacctccaccgtctatggcgaattctcgcccgagttccgcaag
cagatacccggtgcggaagaagacccgcgcttctgggcctccggcctttcgcttatcgcc
catccggtcaatcccaatgtgccggccgtgcacatgaacacccgcatggtcgtcaccacc
agccattggttcggcggcggtgcggatctgacgccggtgctcggccgcaggcggacacag
caggacccggatacccagctgttccaccgcgccttcgagattacctgcaaccgtcatccg
atcgccgattatccgcgatacaagagctggtgcgacgagtatttcttcctgaagcaccgc
gacgagccgcgtggcaccggcggcatctttttcgactggctgcaccctgacgaggagaaa
ggtggctgggacgccaatttcaccttcgtgcaggatgtcggccgcgccttcaacctcgtc
tatccgaaaatcgtccgcgccaatttcaaccagaactggacggaagaggaccgcgacgag
cagctcatccgccgcggccgctacgtggaattcaacctgctttacgatcgcggcacgatc
ttcggtctgaagaccggaggtaacgtcgaatcaatcctgtcatcgctgccgccggtggtg
cgctggccttaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   UWASH (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (1)   
   PROSITE (1)   
All databases (15)

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