KEGG   Pseudazoarcus pumilus: C0099_03120
Entry
C0099_03120       CDS       T05265                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
atw  Pseudazoarcus pumilus
Pathway
atw03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:atw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    C0099_03120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atw03021]
    C0099_03120
   03400 DNA repair and recombination proteins [BR:atw03400]
    C0099_03120
Enzymes [BR:atw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     C0099_03120
Transcription machinery [BR:atw03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     C0099_03120
DNA repair and recombination proteins [BR:atw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      C0099_03120
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2
Other DBs
NCBI-ProteinID: AUN94024
UniProt: A0A2I6S428
Position
647083..648063
AA seq 326 aa
MQSNSLLKPRIIDVHNISPVQARVTMEPFERGFGHTLGNALRRILLSSLPGCAPTEVTIE
GVLHEYSTLDGIREDIVDVLLNLKGVVLKLHNRSEATLRLAREGEGVVTAADLEIGHDVE
IINPDHVIAHLAPGGKLDMEVQIEQGRGYEPANTRPVSAESKSIGRIMLDASFSPVRRVS
YLVESARVEQRTDLDRLVIDIETNGAVDPEEAIRYAARVLMDQLSVFAELEGTEPVEERV
ESVTIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTETELLKTPNLGRKSLNEIK
EVLATRGLTLGMKLENWPPAGLEKLG
NT seq 981 nt   +upstreamnt  +downstreamnt
atgcaaagcaattcactgctgaaaccgcgcatcatcgacgtgcacaatatttcgcctgtg
caggcgcgcgtgacgatggagccgttcgagcgtggtttcggccatacgctgggtaacgcg
ctgcgtcgcatcctgctgtcgtcgctgcccggttgtgcaccgaccgaagtgaccatcgag
ggcgtgctgcacgagtactcgacgctcgacggcattcgcgaagacatcgtcgatgtgctg
ctcaacctcaagggcgtggtgctcaagctgcacaaccgctccgaggccacgctgcgtctt
gcccgcgagggtgagggcgtggtcaccgcggccgatctggagatcggtcacgacgtcgag
atcatcaacccggatcacgtcatcgcgcatctggcgccgggcggcaagctggacatggaa
gtgcagatcgagcaggggcgcggctatgagcccgccaacacgcgtccggtcagtgccgag
agcaagagcatcggacgcatcatgctcgacgcctcgttcagcccggtgcgtcgtgtcagc
tatctggtcgagagcgctcgtgtcgagcagcgtaccgacctggatcgcctcgtcatcgac
atcgaaaccaacggcgcggtcgaccccgaagaggccattcgttacgccgcgcgcgtgctg
atggaccagctctcggtgttcgccgagctcgaaggcaccgagccggtcgaagagcgcgtc
gaaagcgtgaccatcgatccggtgctgctgcgcccggtcgatgatctcgaactgaccgtg
cgttcggccaactgcctcaaggcagagaacatctattacatcggtgacctgatccagcgc
accgagaccgagctgctcaagacccccaacctgggtcgcaagtcgctcaacgagatcaag
gaagtgttggccacgcgcgggctcacactcgggatgaaacttgaaaactggccgccggcc
gggctcgaaaagctcggttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system