KEGG   Trichormus variabilis: Ava_0115
Entry
Ava_0115          CDS       T00277                                 
Name
(GenBank) Holliday junction endonuclease RuvC
  KO
K01159  crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
Organism
ava  Trichormus variabilis
Pathway
ava03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ava00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Ava_0115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ava03400]
    Ava_0115
Enzymes [BR:ava01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.10  crossover junction endodeoxyribonuclease
     Ava_0115
DNA repair and recombination proteins [BR:ava03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Ava_0115
    RecFOR pathway proteins
     Ava_0115
SSDB
Motif
Pfam: RuvC DUF3334
Other DBs
NCBI-ProteinID: ABA19741
CyanoBase: Ava_0115
UniProt: Q3MGZ5
Position
complement(153736..154227)
AA seq 163 aa
MEKRILGLDPGLAILGFGAITCTPGLTQLQSTKVNILDFGVIKTSADIEIGQRLCTLFDD
LHTVIDNLQPDVVAIEKLFFYRMSSTIVVAQARGVVMLALAQHHLPYVEFTPAQVKLALT
GYGNADKSEVQEAVARELDLAEIPQPDDAADALAVALTAWYQM
NT seq 492 nt   +upstreamnt  +downstreamnt
atggaaaagcgaattttaggattagacccaggactggcaattttaggatttggggcaatt
acttgtacaccaggcttaacccaactacaaagtacaaaagtcaatatcttggactttgga
gtcatcaaaacctcagcagatatcgagattgggcaacgcttgtgtaccttgttcgatgat
ttgcacacagtgattgataatttacaacctgatgtagtcgcaattgaaaaactgttcttc
tatcgtatgtcaagtacaattgttgtggcacaagctagaggtgtagtaatgttagcctta
gcacagcaccatttgccttatgtcgaatttacaccagcacaggttaagctagctttaacg
ggatatggcaacgctgataaatctgaagtgcaagaggcggtagcacgagagttagattta
gccgaaattcctcagcctgatgatgctgctgatgctttggctgtagctttgacagcttgg
tatcaaatgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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