KEGG A.variabilis: Ava

Anabaena variabilis: Ava_0226

Entry

Ava_0226 CDS A.variabilis

Gene name alaS

Definition alanyl-tRNA synthetase (EC:6.1.1.7)

Orthology K01872 alanyl-tRNA synthetase [EC:6.1.1.7]

Pathway ava00970 Aminoacyl-tRNA biosynthesis

Class Genetic Information Processing; Translation; Aminoacyl-tRNA
biosynthesis [PATH:ava00970]

SSDB

Motif Pfam: tRNA-synt_2c tRNA_SAD DHHA1 GTP_EFTU_D2
PROSITE: AA_TRNA_LIGASE_II_ALA

Other DBs NCBI-GI: 75906451
NCBI-GeneID: 3683029
JGI: Ava0226
CyanoBase: Ava_0226
CYORF: Ava_0226
UniProt: Q3MGN4

Position 288328..290970

AA seq 880 aa
MSSNPQHLSGNEIRTRFLDFYAQRGHQILASASLVPEDPTVLLTIAGMLPFKPIFLGQRT
PEFKRATTSQKCIRTNDIENVGRTKRHQTFFEMLGNFSFGDYFKEQAIAWGWEISTEVFG
LPKERLVVSVFEEDDEAYVIWRDQIGVTEARIKRMGADDNFWVSGPTGPCGPCSEIYYDF
HPERGDENIDLEDDTRFIEFYNLVFMQYNRDASGNLTPLQNKNIDTGMGLERITQILQQV
PNNYETDLIFPIIETAAKIAGIDYHSSDETTKVSLKVIGDHVRSVVHMIADEIRASNVGR
GYVLRRLIRRVVRHGRLIGISGEFINQVAERAIALSESAYPNVRKRETVIKAELEREEAN
FLKTLDRGEKLLEEIIQQVKKQGQTIISGESAFTLYDTYGFPLELTQEIAEENNLTVDED
DFNVEMQKQVERAKAAHETIDLTVQGSLDKLAEHIHATEFIGYSQATATAKVEVLLVDGV
VQEEAEAGTEVQIVLDKTPFYAESGGQIGDRGYISGDGIVVQVEDVKKESDFFVHFGRIE
RGTLRVGDSVTAQIDRAGRRRAQANHTATHLLQAALKTIVDGGISQAGSLVSFDRLRFDF
NSPRGLTAEEIQQVEEQINTWIAEAHSAKIEVLPLAEAKARGAVAMFGEKYGDEVRVIDF
PGVSMELCGGTHVSNTAEIGVFKIISEAGVASGVRRIEAVSGLAVLDYLNVRDKVVKDLS
DRFKVKPEELPERITTLQNELRTTEKQLETLKGQLAIAKSDSLLQTADTLGDHKIIVAQL
EGVDPESLKSAAERLLQKIGNGAVVLGSVPEADKVSLVAAFSPEVNKKGLQAGKFIGAIA
KICGGGGGGRPNLAQAGGRDASKLPTALEQAQSELKSALG

NT seq 2643 nt +upstreamnt +downstreamnt
atgtcttcaaacccgcagcacctgagtggtaacgaaattcgcacccgattcctcgacttc
tatgcccaaaggggacaccaaattttggctagtgcttcccttgtgccggaagatccaacc
gtgctgctgacgatcgcggggatgctaccatttaagccgatattcctggggcagcgcaca
ccagaatttaaacgggcgacaacttcgcaaaagtgcatccgtactaacgacatcgagaat
gtgggacgcaccaaacggcatcaaaccttttttgaaatgctgggtaacttcagctttggt
gactactttaaagaacaagcgatcgcctggggttgggaaatctccacagaagtttttggc
ttacccaaagaacgcctagtagtcagcgtttttgaggaagatgatgaagcctacgtaatt
tggcgcgatcaaattggtgtaacggaagccagaattaagcgcatgggtgcagatgataac
ttttgggtatctggccccactggcccctgtggcccttgttcagaaatttattacgacttc
cacccagaacggggggatgaaaatattgatttagaagatgacacccggtttatcgagttt
tataacttggtattcatgcaatacaatcgggatgcgtcgggtaatttaacaccactgcaa
aacaaaaacattgataccgggatgggtttggagagaatcacccaaatcctgcaacaagta
ccgaataattacgaaactgacttaattttcccgattatcgagacagcagccaaaattgct
ggcattgactaccacagcagcgatgagactaccaaagtttccctgaaggtgattggtgat
catgtccgttccgttgtccacatgattgctgatgaaattcgcgcctccaatgtggggcgg
ggttatgtgttgcggcgattaattcggcgggtggtgcgtcatggacgattgattgggatt
agcggggagtttattaaccaagtagccgaaagagcgatcgctctttccgaatcagcatac
cccaatgttcgcaaacgggaaaccgtcatcaaagcagaactagaacgggaagaagctaat
ttcctcaaaacccttgatagaggggaaaaactcctagaggaaattatccaacaggtgaag
aagcaaggacaaacaattattagtggtgaaagtgctttcactctttacgatacctacggc
ttccccctggaactaactcaagaaatcgccgaagaaaacaacctcaccgttgatgaggac
gactttaatgtcgagatgcagaaacaagtggaacgcgctaaagcagcccacgaaaccatc
gatttaactgtgcaaggttccctcgacaaattagcagaacatatccacgctaccgagttc
atcggttatagccaagcaacagcaacagcaaaagtagaagttttgttagtagatggtgtt
gttcaagaagaagcagaagcaggaaccgaagtacagattgtccttgacaaaacgccattc
tatgctgaatctgggggacaaataggcgatcgcggttatatctccggtgatgggatcgtt
gttcaggtggaagatgtcaaaaaagaatctgatttcttcgtacatttcggacgcatcgaa
cggggaaccctgcgcgtaggtgatagcgtcaccgcccaaattgaccgcgctggtcgtcgt
cgcgcccaagcgaaccataccgccacccatctattacaagcagccttaaagaccattgtt
gatggtggcatatcgcaagccggttctctcgtctctttcgacagattgcgctttgacttc
aactctccccgtgggttgacagcagaggaaattcaacaagttgaagaacagattaacacc
tggattgctgaagcccactccgccaaaatcgaagtattacccctagctgaggcgaaagcc
agaggtgcggtagccatgtttggggaaaaatacggtgatgaagtccgagtcatagatttc
cccggcgtatcgatggaactatgcggtggtacgcacgtaagtaataccgcagagatcggc
gtatttaagattatttctgaagctggtgttgcttccggagtgcggcggattgaagctgtg
tctggactagctgtactggattacttgaatgtgcgggataaagtagttaaagacttaagc
gatcgctttaaagtcaaacccgaagaactaccagagagaatcaccactctgcaaaatgaa
ctgagaaccacagaaaagcaactagaaaccctcaagggacaactagcgatcgccaaatcc
gacagcctactacaaacagcagacactcttggcgaccataaaatcatagttgcccaattg
gaaggcgtagacccagaatccttgaaaagtgcagccgaacgcctactacaaaaaatcggt
aacggcgctgtggtgttgggttccgttcccgaagccgacaaagttagcttagttgcagcc
ttcagcccagaagtcaacaaaaaaggactacaggccggtaaattcattggtgcgatcgcc
aaaatttgcggcggtggcggcggcggtagaccaaacctcgcccaagccggcggacgcgat
gccagtaaactaccaaccgccttggaacaagcccagagtgagttaaaatcggcgttaggt
tag

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   CYANOBASE-AVA (1)   
   CYORF-AVA (1)   
   JGI-AVA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (4)   
   PROSITE (1)   
All databases (19)

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