KEGG   Anabaena variabilis: Ava_1271Help
Entry
Ava_1271          CDS       T00277                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ava  Anabaena variabilis
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ava00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Ava_1271
Enzymes [BR:ava01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Ava_1271
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Ava_1271
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
CyanoBase: 
CYORF: 
UniProt: 
Position
1560432..1561265
Genome map
AA seq 277 aa AA seqDB search
MPELPEVETVRRGLNQLTLNRKITGGDVLLHRTIAHPFSVGDFLNGITGDSISAWHRRGK
YLLASTTSAAWLGVHLRMTGQLLWLNQDEPLHKHTRVRIFFEDQQELRFVDQRTFGQMWW
VSSGMAVESVITGLAKLAVDPFSPEFTVEYLANKLHNRRRPIKTALLDQSVVAGLGNIYA
DEALFKSGVLPETLCTEVQLKQIELLRTAIIQVLETSIEAGGTTFSNFLNVKGVNGNYGG
VAWVYNRAGEPCKVCGDVIQRIKLGGRSSHFCRQCQV
NT seq 834 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattgcctgaagttgaaacagtacggcggggtttaaaccaactaaccctaaac
cgaaaaattacgggtggagatgtgttgcttcatcgcaccatcgctcaccctttttctgtt
ggtgattttttgaatggaattaccggtgattccattagtgcttggcatcgtcgcggtaaa
tatctcctcgcttccactacttccgccgcttggctaggtgtgcatctgaggatgactggt
caattactgtggttaaaccaagatgagcctttacataagcacacgcgggtaagaatattt
ttcgaggatcaacaggaattacgctttgttgaccaacgaactttcggtcaaatgtggtgg
gtttcatcgggaatggctgtagaaagcgtgattactggtttagctaaacttgccgtagat
cccttttcacctgaatttactgttgagtaccttgctaataagctgcataatcgtcgccgt
cccataaaaacagcactattagaccagtcggttgttgcaggattaggtaacatctatgct
gacgaagcattgtttaaaagtggtgtgttaccagaaactctatgtacagaagtgcagtta
aagcaaattgagcttttgaggacggcaattattcaagttttggaaaccagtattgaggct
ggtggtacaacttttagtaattttctcaacgttaaaggggtcaacggtaattatggtggt
gtcgcctgggtgtataaccgtgcaggggaaccatgtaaagtttgtggtgatgtaattcag
cgcatcaagctaggtggaagatccagccatttttgtcgccagtgtcaagtttag

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