KEGG   Azotobacter vinelandii CA6: AvCA6_03400Help
Entry
AvCA6_03400       CDS       T02634                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
avd  Azotobacter vinelandii CA6
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:avd00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    AvCA6_03400
Enzymes [BR:avd01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     AvCA6_03400
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     AvCA6_03400
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
317748..318596
Genome map
AA seq 282 aa AA seqDB search
MVGARSFPSRAAMPELPEVETTRRGIAPHLVGQRVERVVVRERRLRWPIPEDLDVRLSGQ
RIEAVERRAKYLLIRAEAGTLIGHLGMSGSLRLVEAGLPAVRHEHVDILLESGLALRYTD
PRRFGALLWSADPLEHELLRRLGPEPLGEDFDGERLYRLSRGKSVAVKPFIMDNAVVVGV
GNIYASEALFAAGIDPRRAAGSVSRARYRRLAEEIRRILAQAIECGGTTLRDFVGGDGKP
GYFQQTLLVYGRGGEFCKVCGSTLHEVRLGQRASVYCGRCQR
NT seq 849 nt NT seq  +upstreamnt  +downstreamnt
atggtcggtgcccgctcgtttccatcccgtgccgccatgcccgaattgcccgaagtcgaa
accacccgccgcggcatcgccccgcacctcgtcggccagcgcgtcgagcgggtcgtcgtc
cgcgagcgccggctgcgctggccgatccccgaggatctcgacgtgcgcctgtccggccag
cgcatcgaggcggtggagcgccgcgccaagtacctcctgatccgcgccgaagcgggcacc
ctgatcggccacctgggcatgtccggcagcctgcgcctggtcgaggccgggttgccggcg
gtcaggcacgagcacgtcgacatcctgctggagtcgggactggcgctgcgctacaccgac
ccgcggcgcttcggcgcgctgctgtggagcgccgacccgctggagcacgagctgctgcgc
cggctcggtccggagccgctgggcgaggacttcgacggcgagcgcctgtaccggctgtcg
cgcggcaagagcgtggcggtcaagccgttcatcatggacaacgcggtggtggtcggggtg
ggcaatatctacgccagcgaggcgctgttcgccgccggtatcgacccgcgccgcgccgcc
ggctcggtctcgcgggcgcgctaccgacgtctggccgaagagatccggcgcatcctcgcc
caggccatcgagtgcggcggcaccaccctgcgcgatttcgtcggcggcgacggcaagccc
ggctacttccagcagaccctgctggtctacggacgcggcggcgagttctgcaaggtctgc
ggcagcaccctgcacgaggttcgcctcggccagcgcgccagcgtctactgcggccgctgc
cagcgctga

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