KEGG   Agrobacterium vitis: Avi_0020Help
Entry
Avi_0020          CDS       T00851                                 

Gene name
trpB
Definition
tryptophan synthase subunit beta
Orthology
K01696  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
avi  Agrobacterium vitis
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:avi00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    Avi_0020 (trpB)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Avi_0020 (trpB)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    Avi_0020 (trpB)
Enzymes [BR:avi01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     Avi_0020 (trpB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1:15199..16419
Genome map
AA seq 406 aa AA seqDB search
MNQNPIPNSFRSGPDEDGRFGIFGGRFVAETLMPLILDLQAEWENAKTDPSFKAELDHLN
THYTGRPSPLYFAERLTAELGGAKIYFKRDELNHTGSHKINNCLGQILLAKRMGKTRIIA
ETGAGQHGVASATVAARFGLPCIVYMGATDVERQAPNVFRMKLLGAEVRPVSSGHGTLKD
AMNEALRDWVTNVDETYYMIGTAAGPHPYPEMVREFQSVIGKESREQMMAAEGRLPDMLV
AAVGGGSNAIGLFHPFLDDESVRMIGVEAGGKGLDGNEHCASLTAGSPGVLHGNRTYLLQ
DSDGQIKDGHSISAGLDYPGIGPEHSWLKDIGRVEYVPIMDTEALEAFQLLTRTEGIIPA
LEPSHALAEVMKRAPKMGKDEIILMNLCGRGDKDIFTVGKILGMGL
NT seq 1221 nt NT seq  +upstreamnt  +downstreamnt
gtgaaccagaacccaattccgaattccttccggtccgggccggatgaagatggtcgtttc
ggcattttcggaggccgcttcgtggccgaaaccttgatgccgctgatcctggatctgcag
gcggaatgggaaaatgccaagaccgaccccagcttcaaggctgaactcgatcacctcaac
acccattataccgggcgtccgagcccgctctatttcgccgagcggctgacggcggagctt
ggtggcgccaagatctatttcaagcgcgacgagttgaaccataccggttcgcacaagatc
aacaattgtctcggccagatcctgctggccaagcgcatgggcaagacccggattatcgcc
gagaccggcgctggccagcacggcgtggcctcggccaccgtcgcggctcgtttcggtctg
ccctgcatcgtctatatgggtgccactgatgtggagcgccaggcaccgaacgtcttccgc
atgaagctgctcggtgcggaagtccgcccggtgagttcagggcatggaaccttgaaggat
gcgatgaacgaggccctgcgcgactgggtcaccaatgtcgatgagacctactacatgatc
ggcacggctgccggtccgcatccctatccggaaatggtccgtgaattccagtcggtgatc
ggcaaggaatcccgcgagcagatgatggctgccgaaggccgcctgccggatatgctggtg
gcagctgtcggcggtggctccaatgccattggcctgttccatccgttcctcgatgatgag
agcgtgcggatgatcggtgtcgaggctggcggcaaggggcttgatggcaatgagcattgc
gcctcgctgaccgcaggctcccctggcgtcctgcatggcaaccgcacctatctgctgcaa
gacagcgacgggcagatcaaggatggccattcgatttcggccgggcttgattatccgggt
atcggtccggaacattcctggttgaaggatatcggccgggtggaatatgtgccgatcatg
gataccgaagcgctggaggctttccagcttctgacccgcaccgaaggcattattccggct
ctcgaacccagccacgccctggccgaggtgatgaagcgcgctccgaaaatgggcaaggac
gagatcatcctgatgaacctttgcggacgcggcgacaaggacatctttacggtcggcaag
attctgggaatggggctctga

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