KEGG   Allorhizobium ampelinum: Avi_0175
Entry
Avi_0175          CDS       T00851                                 
Symbol
pnpA
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
avi  Allorhizobium ampelinum
Pathway
avi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:avi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Avi_0175 (pnpA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:avi03019]
    Avi_0175 (pnpA)
   03016 Transfer RNA biogenesis [BR:avi03016]
    Avi_0175 (pnpA)
Enzymes [BR:avi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     Avi_0175 (pnpA)
Messenger RNA biogenesis [BR:avi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Avi_0175 (pnpA)
Transfer RNA biogenesis [BR:avi03016]
 Prokaryotic type
  tRNA degradation factors
   Avi_0175 (pnpA)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase S1 KH_1
Other DBs
NCBI-ProteinID: ACM35106
UniProt: B9JYL0
Position
1:162773..164917
AA seq 714 aa
MFNVHSVEIEWAGRPLKLETGKIARQADGAVLASYGETVVLATVVSAKSPKPGQDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSEKETLVSRLIDRPIRPLFPEGYKNDTQVVVTVIQH
DLENDPDVLSMVAASAALTLSGVPFMGPVGGARVGYINGEYVLNPHLDEMDESVLDLVVA
GTQDAVLMVESEAKELNEDVMLGAVMFGHRGFQPVIDAIIKLAEVAAKEPREFEPEDHSA
LEAEMLSIAEAELRDAYKITQKADRYTAVDAVKAKVKAHFFPEGAEPKYTNEVIGAVFKH
LQAKIVRWNILDTKSRIDGRDLETVRAIVSEVGILPRTHGSALFTRGETQAIVVATLGTG
EDEQYVDSLTGMYKERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPMLPSPE
QFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLILEGERFAVLS
DILGDEDHLGDMDFKVAGTEAGITSLQMDIKIAGITEEIMKVALAQAQNGRKHILGEMAN
AITEGRSQLGEFAPRIEVMTIPVDKIREVIGSGGKVIREIVEKTGAKINIEDDGTIKIAS
ASGKEIEAARKWIHSIVAEPEIGVVYEGTVVKTADFGAFVNFFGSRDGLVHISQLAVDRV
AKTQDVVKEGDKVWVKLMGFDERGKVRLSMKVVDQATGKEIVGDKKAEGDAAAE
NT seq 2145 nt   +upstreamnt  +downstreamnt
atgtttaatgttcacagcgttgaaatcgagtgggccggccggccgctgaagctggaaacc
ggcaagatcgcccgtcaggctgacggcgccgttctcgccagctacggcgagaccgttgtt
ctggccaccgtcgtttccgccaagtcgccgaagccgggtcaggatttcttcccgctcacc
gtcaactatcaggaaaagacctatgccgccggtaagatcccgggtggctatttcaagcgc
gaaggccgtccgagcgaaaaggaaaccctggtttcccgcctgatcgaccgcccgatccgc
ccacttttcccggaaggttacaagaacgacacccaggtcgtcgtgaccgttattcagcac
gaccttgaaaacgatccggacgttctgtcgatggttgccgcttcggctgccctgacactg
tctggcgtaccgttcatgggcccggtcggcggtgcgcgcgttggctatatcaatggcgaa
tacgttctcaacccgcatctcgacgagatggatgaatccgttctcgacctcgtggttgcc
ggtacgcaggatgccgtcctgatggttgaatccgaagccaaggaactgaacgaagacgtc
atgctcggcgccgtgatgttcggtcaccgtggcttccagccggtcatcgacgcgatcatc
aagctcgccgaagtggctgccaaggagccgcgcgaattcgaaccggaagatcattccgct
ctcgaagccgaaatgctctcgattgccgaagccgaactgcgcgacgcctacaagatcacc
cagaaggctgatcgttatacggccgtcgatgccgtaaaggccaaggtcaaggcacacttc
tttccagagggtgcagagcctaaatacaccaacgaagtgatcggcgcggtcttcaagcac
ctgcaagccaagatcgttcgctggaacattctcgacaccaagagccgtatcgatggccgt
gacctcgaaacggttcgtgcgattgtctccgaagtcggcatcctgccgcgtacgcacggt
tcggcgctgtttacccgtggcgaaacccaggcgatcgtggttgccacgctcggcactggc
gaagatgagcagtatgttgacagcctgacgggcatgtacaaggaacgtttccttctgcat
tacaacttccctccttattcggttggtgaaactggccgcatgggctccccgggccgccgc
gaaatcggccatggcaagctggcatggcgcgccattcgcccgatgctgccttcgcctgaa
cagttcccctacacgctgcgcgtcgtctccgagatcaccgaatcgaacggctcgtcctcg
atggcaacggtttgcggcacctcgctggcgctgatggatgcgggcgttccgctggccaag
ccggttgctggtatcgccatgggcctgatcctggaaggcgagcgttttgctgttctctcc
gacattctcggcgatgaagatcatctcggcgatatggacttcaaggtggctggtacggaa
gccggtatcacctcgttgcagatggacatcaagatcgccggtattaccgaagagatcatg
aaggttgccctggcgcaggcccagaacggccgcaagcacattctcggcgaaatggccaat
gccatcaccgaaggtcgctcgcagctcggcgaattcgcaccgcgcatcgaagtcatgacc
atcccggtcgataagatccgtgaagtcatcggttccggtggtaaggttatccgcgaaatc
gtcgaaaaaaccggcgccaagatcaacatcgaagacgatggtacgatcaagatcgcctct
gcttccggtaaggaaatcgaagccgcccgcaagtggattcactcgatcgttgctgagcct
gaaatcggcgttgtctatgaaggcacggtcgtcaagaccgctgacttcggcgctttcgtc
aatttcttcggttcgcgagacggtctcgtccacatcagccagctggctgtagaccgtgtt
gccaagacccaggatgtggtcaaggaaggcgacaaggtttgggtcaagctgatgggcttt
gacgagcgcggcaaggttcgcctgtccatgaaggttgtcgatcaggcaaccggcaaggaa
atcgtcggcgacaagaaggccgaaggcgacgctgccgctgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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