KEGG T00851: Avi

Agrobacterium vitis S4: Avi_0180

Entry

Avi_0180 CDS T00851

Gene name

fabB

Definition

3-oxoacyl-ACP synthase

Orthology

K00647

3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]

Organism

avi Agrobacterium vitis S4

Pathway

avi00061	Fatty acid biosynthesis
avi00780	Biotin metabolism
avi01100	Metabolic pathways

Module

avi_M00083

Fatty acid biosynthesis, elongation

Class

Metabolism; Lipid metabolism; Fatty acid biosynthesis [PATH:avi00061]
Metabolism; Metabolism of cofactors and vitamins; Biotin metabolism [PATH:avi00780]

SSDB

Motif

Pfam:

ketoacyl-synt Ketoacyl-synt_C Thiolase_N

Other DBs

NCBI-GI:

222147156

NCBI-GeneID:

7388339

UniProt:

B9JYL3

Position

1:complement(166988..168211)

AA seq 407 aa
MRRVVVTGLGIVSSIGNNAAEVTASLRDARSGISFSPDFAEHGFKCQVWGQPSLDTTDLV
DRRAMRFLSQGGAWNHVAMKQAIADSGLEEKDYSANERTGIIMGSGGPSTRQIVEAADIT
RQNKSPKRIGPFAVPKAMSSTASATLATWFKIHGVNYSISSACSTSAHCIGNAAEMIQWG
KQDIMFAGGHEDLDWSMSDLFDAMGAMSTKYNETPALASRAYDTNRDGFVIAGGAGVLVL
EELEHAKARGAKIYAELTGYGATSDGYDMVAPSGEGAIRCMRQALSTVKGDVDYINTHGT
STPVGDSKEIGAIRTVFGDKIPPIQSTKSLTGHSLGAAGVQESIYGLLMMQEGFIGESAH
ITELDPEFEGVPVVRKRIDNAKIDTVLSNSFGFGGTNATLVFQRHNG

NT seq 1224 nt +upstreamnt +downstreamnt
atgagacgggtagtagttacgggtctgggcattgtgtcctctatcggcaacaatgccgcg
gaagtcacagcatctctccgcgacgccaggtccggcatttccttttctcccgattttgcc
gagcatggcttcaaatgccaggtctggggtcagccttcgctggatacgaccgaccttgtc
gaccgtcgtgccatgcgcttcctgtcacagggcggcgcctggaaccatgtggcgatgaaa
caggcgattgccgattcgggcctggaggaaaaggattattccgccaacgagcgcaccggc
atcatcatgggctcgggtggtccttcgacccggcagatcgtcgaggcggccgatattact
cgccagaacaaaagcccgaagcgcatcgggccgttcgccgtgccgaaagccatgtcatcg
acggcatctgcgacgcttgccacctggttcaagatccacggcgtcaactactcgatctcg
tcggcctgctcgacctcggcccattgcatcggcaatgccgctgaaatgattcaatggggc
aagcaggacatcatgttcgcaggtggtcatgaggatctcgattggtcgatgtccgacctg
ttcgatgccatgggcgcaatgtctaccaaatacaacgagacgccagctctggcttcgcgt
gcctatgacaccaaccgcgatggcttcgtcatcgctggcggcgccggtgtgctggttctg
gaagaactggaacatgccaaggcgcgtggcgccaagatctatgccgaactcaccggctac
ggcgcgacctcggacggttacgacatggtcgctccgtctggcgagggcgccatccgctgc
atgcgccaggcgctctcaaccgttaaaggcgacgtggattacatcaacacccacggcaca
tcgacaccggtgggcgacagcaaggaaatcggcgcgatccgcaccgtatttggcgacaaa
atcccaccgatccagtccaccaagtcgctgaccggccattcgctgggagcggcaggcgta
caggaatcgatctacggcctgctgatgatgcaggaaggctttattggcgaaagcgcccat
attactgagctcgatccagaattcgaaggcgtaccggtcgtgcgcaaacgaatcgacaat
gccaagatcgacacagtcctgtccaattcctttggttttggtggaacgaatgcgacgctg
gtgttccagcgtcataacggatga

All links

Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (23)   
   KEGG COMPOUND (23)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (48)   

Download RDF

DBGET integrated database retrieval system