KEGG   Agrobacterium vitis: Avi_0389Help
Entry
Avi_0389          CDS       T00851                                 

Gene name
mutM
Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
avi  Agrobacterium vitis
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:avi00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Avi_0389 (mutM)
Enzymes [BR:avi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Avi_0389 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Avi_0389 (mutM)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1:333812..334705
Genome map
AA seq 297 aa AA seqDB search
MPELPEVETVKRGLAPSMEGRRLTRLELRRTDLRFPLPVDFAARTQGRLIVSLSRRAKYL
LIDLDDGVSIVSHLGMSGSYRIEAANETGLPGQFHMARSRDEKHDHVIFHLSGPEGDPLR
VIYNDPRRFGFMDMVERRHMDRHAAFAGLGPEPVGNALDADYLAFRFKGKAQPLKTALLD
QKVIAGLGNIYVCEALWRAHLSPETPARALVNAEGKPVAALEDLTQAIRTVIAEAIEAGG
SSLRDHIQADGSLGYFQHSFNVYDREGEACRTPGCTGTVERMTQAGRSTFHCPQCQR
NT seq 894 nt NT seq  +upstreamnt  +downstreamnt
atgccggaattaccagaggtggaaaccgtaaaacggggactggcgccatccatggagggg
cggcggctgacccgcctggaacttcggcggacggatctgcgctttcccttgccggtcgat
tttgcggcgaggacgcaaggccggcttatcgtctctctgtcgcggcgagcgaaatacctg
ctgatcgatctcgatgacggtgtctcgattgtctcccatcttggcatgtccggctcctat
cggatcgaagccgcaaatgagaccggcctgccgggccagttccatatggcgcgctcccgc
gatgaaaagcatgaccatgtgatctttcatctgagcgggccggagggcgacccattgagg
gtgatctataatgacccacgccgcttcggcttcatggatatggtcgaacgccgtcacatg
gatcgtcatgccgcctttgccgggctggggccggagccggtcggcaatgcgctcgatgcc
gactatctggccttccggttcaagggcaaggcgcagcctttaaagacggctcttctcgat
cagaaggtgattgctggtcttggcaatatctatgtctgcgaagctttgtggcgggcgcat
ttgtcgccggaaacacctgcgcgcgcgctggttaatgcagaaggaaagcccgtggcggca
ctggaagacctgacgcaggccattcgcacggtcatcgccgaggcgatcgaggctggcggc
tcctcgctgcgagatcatatccaggcggatggctcgctcggttatttccagcacagtttc
aatgtctatgaccgcgaaggcgaagcctgccgcacccccggctgcacagggacggtcgag
cgcatgacccaggcggggcggtctaccttccattgccctcagtgtcagagatga

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