KEGG   Agrobacterium vitis: Avi_0474Help
Entry
Avi_0474          CDS       T00851                                 

Gene name
dapE
Definition
(GenBank) succinyl-diaminopimelate desuccinylase
  KO
K01439  succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
avi  Agrobacterium vitis
Pathway
avi00300  Lysine biosynthesis
avi01100  Metabolic pathways
avi01120  Microbial metabolism in diverse environments
avi01230  Biosynthesis of amino acids
Module
avi_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:avi00001]
 Metabolism
  Amino acid metabolism
   00300 Lysine biosynthesis
    Avi_0474 (dapE)
Enzymes [BR:avi01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     Avi_0474 (dapE)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Peptidase_M20 M20_dimer Peptidase_M28
Motif
Other DBs
NCBI-ProteinID: ACM35331
UniProt: B9JZL9
Position
1:402014..403228
Genome map
AA seq 404 aa AA seqDB search
MSKHPANSSATDPVDNLQTLIRCPSVTPAEGGALSALAAMLEPLGFTVERMVAREEGTPD
VENLYARLGTEGPHLMFAGHTDVVPVGNEADWTYPPFSAEIAGGELYGRGAVDMKGGIAC
FVAAIARHIESQGAPKGSISFLITGDEEGPSINGTTKLLEWAAAKGERWDACLVGEPTNP
DQLGDMIKIGRRGSLSGEIIVKGVQGHAAYPHLADNPVRGMIKLAEALMHPAFDAGTENF
QPSNLEVTTIDVGNAATNVIPARASAKFNIRFNDTWTAETLRTEIIARLDTASADPLLRP
GRPPIAYELVWADRPSQVFLTRNNALISSLSAAIEKMTGKTPALSTTGGTSDARFIKDYC
PVVEFGLVGQTMHMVDERVAVSDLEALTGIYGAFISSWFTHAGA
NT seq 1215 nt NT seq  +upstreamnt  +downstreamnt
atgtcaaagcatccagccaattcatctgccaccgatcccgtcgacaatcttcagaccctg
atccgctgcccctccgtgacgcctgccgagggcggggcgctgtcggcgctggccgccatg
ctggaaccgttgggctttaccgtggaacggatggtggcgcgcgaagagggcacgccggat
gtcgagaacctctatgcccggctgggcacggaggggccgcatctgatgtttgccgggcat
acagatgtggtgcctgtaggcaatgaggcggactggacctatccgccgttttccgccgag
atcgctggaggcgaactttacggacgtggcgcggtcgatatgaagggcggcatcgcctgc
tttgtcgccgccattgcccgccatatcgaaagccaaggcgcgccgaaggggtctatttcc
ttcctgataaccggtgatgaggaaggcccctcgatcaacggcaccaccaaactgctagaa
tgggccgccgccaaaggcgagcgctgggatgcctgcctggtgggcgaaccgaccaatccc
gaccagcttggcgacatgatcaagatcgggcggcgcggctcgctgtcaggcgagatcatc
gtaaagggcgtccagggccatgccgcctatccgcatctggccgacaatccggtgcggggc
atgatcaagcttgcggaagcgctgatgcatccggccttcgatgcgggaacggaaaatttt
cagccttccaatctggaagtcacgacgattgatgtcggtaacgccgccaccaatgtcatt
ccggcccgtgccagcgccaaattcaatatccgctttaacgatacctggaccgccgagacg
ctgcggaccgaaatcattgcccggctcgatacggccagcgccgatccgctgctgcgacca
ggccgcccgccgattgcctatgagctggtctgggccgaccggccaagccaggtgttcctg
acccgcaacaacgcgctgatctcctccttgagtgctgccatcgaaaaaatgaccggtaaa
acgccagccctgtcgacaacagggggtacgtccgacgcccgcttcatcaaggattactgc
ccggtggtggaattcggccttgtcggccagaccatgcatatggtcgatgagcgggttgcc
gtctccgatctggaggcgttgaccggcatatatggcgccttcatcagcagctggtttact
catgccggggcttaa

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