KEGG   Agrobacterium vitis: Avi_0628Help
Entry
Avi_0628          CDS       T00851                                 

Gene name
rfbC
Definition
dTDP-4-dehydrorhamnose 3,5-epimerase
Orthology
K01790  
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
Organism
avi  Agrobacterium vitis
Pathway
Streptomycin biosynthesis
Polyketide sugar unit biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:avi00001]
 Metabolism
  Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    Avi_0628 (rfbC)
  Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    Avi_0628 (rfbC)
Enzymes [BR:avi01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.13  dTDP-4-dehydrorhamnose 3,5-epimerase
     Avi_0628 (rfbC)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1:546156..546719
Genome map
AA seq 187 aa AA seqDB search
MSQRFQPEDTAIPGLTLLTRSRFGDERGFLSRLFCGEELAAFGWPGPVLQVNETGTVQKG
TVRGLHFQHAPFGEWKLVTCVEGTILDVALDLRKGSSSFLQHVCVELSGDNCRSLLIPPG
FAHGFQALSDTVRMIYTHSAPYRAEAEGGLHPQDARIGITWPLPVERLSARDQSHPLIQP
DFEGLIA
NT seq 564 nt NT seq  +upstreamnt  +downstreamnt
atgagccaacgtttccagcccgaagacaccgcgattcccggcctgacgctgctgacccgc
agccggtttggcgacgagcgtggttttctcagtcggttgttttgcggtgaagaacttgca
gcttttggctggccggggccggtcttgcaggtcaacgaaaccggcacggtgcaaaaaggc
accgtgcgcggcctgcattttcagcacgccccttttggcgagtggaaactggtgacctgc
gtcgaaggcacaatcctcgacgtggccttggatctgcgcaagggctcgtcgagctttctc
cagcatgtctgtgtcgagctgtcgggcgacaattgccgctcgctgctgatcccgccgggt
tttgcccatggctttcaggcactgagcgacaccgtgcggatgatttatacccattccgcg
ccttaccgtgctgaggctgaaggcgggcttcacccgcaggatgcaaggatcggcatcacc
tggcctttgccggttgagcggctgtcagcccgagaccagagccatccgctgatccagccc
gattttgaaggactgattgcatga

DBGET integrated database retrieval system