KEGG T00851: Avi

Agrobacterium vitis S4: Avi_2463

Entry

Avi_2463 CDS T00851

Gene name

cckA

Definition

two component sensor kinase

Orthology

K13587

two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]

Organism

avi Agrobacterium vitis S4

Pathway

avi02020

Two-component system

Module

avi_M00512

CckA-CtrA/CpdR (cell cycle control) two-component regulatory system

Class

Environmental Information Processing; Signal transduction; Two-component system [PATH:avi02020]

SSDB

Motif

Pfam:

HATPase_c Response_reg PAS_9 PAS PAS_8 PAS_4 HisKA DUF2328 Glucos_trans_II DUF3240 Trp_oprn_chp PAS_10

Other DBs

NCBI-GI:

222148810

NCBI-GeneID:

7385836

UniProt:

B9JWY1

Position

1:complement(2025032..2027650)

AA seq 872 aa
MTNQQQTDESVGPLVDRRPSSGAAFRIVILAFVLLAAAAAFVVFKNSLDNQIVLGVLGVL
AIVGIFFLVSAIIGFIEVMPQTPSDGLGRAFLDSQSEGTLVTDPRGHIIYANAAYGRMTG
VRRATDVQTLEALLSRHREAGEALYRLINGLREDRDGQEEFRLLKPLGPFSDNGSGAHWY
RLRARRLVEKGPHKGLQIWQIADITADRDDQERFFKELQNAIDYLDHAPAGFFSAGRKGE
IFYLNATLSEWLGIDLTQFSPGAIYLKDLVAGEGMALIQSVQAEPGLSKTATLDLDLRRA
DGRSFPARLVHRVRSARDGAPGESRTIVLARQEVIAGDRSDSSASMRFTRFFNNTPMAIA
SVDGQGRILRTNAPFLKFFSDVVSRDDIDRKIRLDAVLHDNERPVFAEALSQARDRQVDI
APIDSRHPLDDMRHFRFYVNAVIDQSDEAPEEAAIVYAVDVTDQKALETQMAQTQKMNAV
GTLAGGIAHDFNNVLTAILLSSDHLLLQARPSDSSFADLMEIKRNANRAAVLVRQLLAFS
RKQTMRPTVLNLTDVIGDLRMLVDRLISGTNVKLHVDYGRDLWPVKADLSQFEQVLINLC
VNARDAMPQGGNITISTRNVTGVEAAAYNHRGLPHEDFVLIEVADRGTGIAPEILDKIFE
PFFTTKDVGKGTGLGLAMVYGIVKQSGGYIYLESEVGEGTTFRIFLPRHIVEPVVIDATL
APGAQAQQGNGRVLAASESENSKEPDDLTGKSAVVLLVEDEDAVRRGGKRMLETRGYTVH
EACSGVEALEIMEELEGKVDIVVSDVVMPEMDGPSLLKELRKTYPDMKFIFVSGYAEDAF
ARNLPADAKFGFLPKPFSLKQLAIAVREMLDA

NT seq 2619 nt +upstreamnt +downstreamnt
atgacaaaccagcagcagacagacgaaagcgtaggcccgctggtggatcgcaggccgagt
agcggggccgcgtttcgcatcgtcatcctggcctttgttctgctggctgccgccgccgcc
ttcgtggtcttcaaaaactcgctggataaccagatcgtgctgggggtgctcggcgtcctg
gccattgttggcattttctttctggtctcggcgattatcgggtttatcgaagtcatgccg
cagactccgtccgacggtcttggccgcgccttcctcgacagccagagtgagggaacgctg
gtcaccgatccgcgtgggcacattatctatgccaatgccgcctatggccggatgaccggc
gtacgcagggcaacagacgtacagacgctggaagcgctgttgtcgcgccatcgcgaggct
ggtgaagcactttaccggctgatcaacggcttgcgcgaggaccgggacgggcaggaggag
tttcggctgctgaagccgctcggaccgttttcagacaatggttccggcgcgcattggtac
cggttgcgggctcgccgtctggtggaaaaggggccgcataaaggccttcagatctggcag
attgccgacattacggccgaccgtgacgaccaagagcggtttttcaaggaattacagaac
gcgatcgattacctcgatcatgcgccagctggcttcttttcggctggccgcaagggcgag
atcttctatctcaatgccaccctgtcggaatggctcggcattgatctcacgcaattttcg
ccaggcgccatctaccttaaggacctggttgcgggcgagggcatggcgctgatccagtcg
gtacaggccgaaccaggcctgtcgaagaccgcgactctcgatctcgacctgcgccgggct
gatggccgcagttttccggctcgccttgtccatagggttcgctcggcccgcgatggcgcg
ccgggggagagccggacgatcgtgctggcccgtcaggaagtcattgctggtgaccgttcg
gattcctcggcctccatgcgctttacccggtttttcaacaatacgccgatggcaattgcc
tcggtggacgggcaggggcgcatcctacgcaccaatgcgccgttcctgaaattcttttcc
gatgtcgtttcccgtgatgatatcgaccgcaagatccggctggatgccgtcctgcatgat
aatgagcgtccggtattcgccgaggcgctgtcgcaggcgcgcgaccggcaggtggacatt
gcaccaattgattcgcgccatccgctggatgacatgcgtcatttccggttctacgtgaac
gcggtcatcgaccagagtgacgaggcgccggaagaggcggccatcgtttacgcggttgac
gtcacggaccagaaggcgctggaaacccagatggcccagacgcagaagatgaatgctgtc
ggcacgctggccgggggcatcgcccatgacttcaacaatgttctgaccgccattcttttg
tcttccgaccatctgctgcttcaggcgcgaccttcggattcgagttttgccgatctgatg
gaaatcaagcgcaatgccaatcgcgccgccgttctggtccggcagttgctggccttttcg
cgcaaacagaccatgcgcccgacggtgctgaacctgaccgatgtgatcggtgacctgcgc
atgttggtcgaccggctgatctcaggcaccaatgtcaagctgcatgtggattacggacgt
gatctttggccggtcaaggcggatctttctcaattcgaacaggtgctgatcaatctctgc
gtcaatgcccgcgatgccatgccgcaaggcggcaatatcaccatcagcacccgcaatgtc
accggtgtcgaagcggccgcctataatcaccgcggcctgccgcatgaggatttcgtgctg
atcgaagtggccgacaggggcaccggcatcgcgcctgagatcctcgacaagatcttcgag
cccttctttaccaccaaggatgtcggcaaagggaccgggctgggacttgccatggtttat
ggcatcgtcaaacagtccggcggctatatctatctggaatcggaggttggcgaaggcacg
acattccggattttcctgccgcgccatattgtcgagccagtggtgatcgatgcgaccctt
gcacctggcgcgcaagcccagcagggcaatggccgggttctggctgcgtccgaatccgaa
aactccaaggagccagacgacctgacaggcaaatccgccgtggttctgctggtagaggac
gaggacgccgtgcggcgcggcggcaagcgcatgctggaaaccaggggctatacggtccac
gaggcctgttccggcgtcgaggcgctggaaatcatggaggaactggaaggcaaggtcgat
attgtcgtttccgacgtggtgatgccggaaatggatggcccgtcgctgttgaaggaattg
cgcaagacctatccggatatgaaattcatcttcgtttctggctatgccgaggatgcattt
gcgcgaaacctgcctgcggatgccaagttcggattcctgccgaagcccttctccctcaag
caattggccatcgccgttcgcgaaatgctggatgcctga

All links

Pathway (2)   
   KEGG PATHWAY (1)   
   KEGG MODULE (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (22)   

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