KEGG T00851: Avi

Agrobacterium vitis S4: Avi_4122

Entry

Avi_4122 CDS T00851

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 component

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

avi Agrobacterium vitis S4

Pathway

avi00020	Citrate cycle (TCA cycle)
avi00310	Lysine degradation
avi00380	Tryptophan metabolism
avi01100	Metabolic pathways
avi01110	Biosynthesis of secondary metabolites
avi01120	Microbial metabolism in diverse environments

Module

avi_M00009	Citrate cycle (TCA cycle, Krebs cycle)
avi_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:avi00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:avi00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:avi00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh CENP-H

Other DBs

NCBI-GI:

222150038

NCBI-GeneID:

7388914

UniProt:

B9JTS5

Position

1:complement(3476471..3479467)

AA seq 998 aa
MARQEANEQFQITSFLDGSNAIYIEQLYARYEDDPNSVSPEWQSFFKALGDNPSDVKKAA
KGASWQRSNWPLTPRTDLVSALDGNWGLVEKAIETKVKGKAEAAAATTGKPVSETDVLQA
TRDSVRAIMMIRAYRMRGHLHAKLDPLGIATAVEDYNELSPLSYGFTEADFDRKIFIDNV
LGLEYATVREMIEILERTYCSTLGFEFMHISNPEEKSWIQERIEGPDKGVDFTVEGKKAI
LQKLVEAEGFEQFIDVKYKGTKRFGLDGGESLIPALEQIIKRGGQEGLEEVVLGMAHRGR
LNVLTNVMHKPHRAVFHEFKGGSFKPDEVEGSGDVKYHLGASSDREFDGNKVHLSLTANP
SHLEIVNPVVMGKARAKQDQLAKVWEGDVIPLKERAKVLPLLLHGDAAFAGQGVVAEILG
LSGLRGHRVAGTMHVIINNQIGFTTNPGFSRSSPYPSDVAKMIEAPIFHVNGDDPEAVVY
AAKVATEFRMKFHKPVVVDMFCYRRFGHNEGDEPSFTQPKMYKEIRAHKTVVQVYGDRLI
AEGVITEGDLEKMKADWRANLEQEFEAGQSYKPNKADWLDGVWSGLRAADNADEQRRGKT
AMPMKSLKEIGRKLSTIPDGFKAHRTIQRFMENRAQMIETGEGIDWAMAEALAFGSLVVE
GHKIRLSGQDCERGTFSQRHSVLYDQESEDRYIPLANLAPNQARYEVINSMLSEEAVLGF
EYGYSLARPNALTLWEAQFGDFANGAQVVFDQFISSGERKWLRMSGLVCLLPHGYEGQGP
EHSSARLERWLQMCAEDNMQVANVTTPSNYYHILRRQVKRDFRKPLILMTPKSLLRHKRA
QSTLAEMAGESSFHRLLWDDAEIIKDGPIKLQKDAKIRRVVMCSGKVYYDLLEEREKRGI
DDVYLLRIEQLYPFPAKALINELSRFRNAEMVWCQEEPKNMGAWSFIDPYLEWVLAHIDA
KYQRVRYTGRPAAASPATGLMSKHLAQLQAFLEDALGG

NT seq 2997 nt +upstreamnt +downstreamnt
atggcaaggcaagaagccaacgagcagtttcagatcacctcgttcctggacggatcgaat
gcgatctatatcgagcagctttatgcgcgttacgaagacgatccgaattcggtatcgcct
gagtggcaatccttcttcaaggcgctgggcgataatccaagcgatgtgaaaaaggcggcc
aagggagcctcctggcagcggagcaattggccgctgacgcctcgtaccgatctggtatcg
gcgctggatggcaattggggtctggtcgagaaggccattgaaaccaaggtcaagggcaag
gcagaagccgcagccgcaaccacgggtaaaccggtttctgaaaccgatgtgttgcaggcg
acccgtgatagcgtgcgcgccatcatgatgatccgcgcatatcgcatgcgcggtcatttg
cacgccaagctcgacccgctgggcattgctacggcggttgaagattacaacgagctgtca
ccattgtcttacggctttaccgaagccgattttgaccgcaagatcttcatcgataacgtt
ctggggctggaatatgccaccgtgcgtgagatgatcgaaattcttgagcgcacctattgc
tcgacgctcggtttcgaattcatgcacatctccaatccggaagaaaaatcctggattcag
gagcgcatcgaaggcccggataaaggcgtcgatttcaccgtcgagggcaagaaggccatt
ctgcaaaagctggttgaggccgaaggctttgagcagtttatcgatgtgaagtacaagggc
accaagcgctttggtttggatggcggcgagtcgctgatcccggcgctggagcagatcatc
aagcgcggtggtcaggagggtcttgaagaggtcgtgcttggcatggcgcatcgtggccgt
ctgaacgtgctgaccaatgtgatgcacaagccgcatcgcgccgtgttccacgagttcaag
ggcggttcgttcaagcctgatgaagttgaaggctccggcgacgtgaagtaccatcttggt
gcctcgtctgaccgcgaattcgatggcaacaaggttcacttgtcgctgacggccaatccg
tcgcatctggaaatcgttaaccctgtggtgatgggtaaggcccgcgccaagcaggaccag
ctggccaaagtctgggaaggcgacgtgattccgctgaaggaacgcgccaaggttctgccg
ctgctgctgcatggtgacgctgcctttgcgggtcagggcgttgtagctgaaattctcggc
ctatccggtctgcgcggtcaccgcgtggctggcacgatgcatgtgatcatcaacaaccag
atcggctttaccaccaatccgggcttctcgcgctcctcgccttatccatcggatgtggcc
aagatgatcgaagcgccgatcttccacgtcaatggggatgatccggaagctgtagtttat
gccgccaaggtggcgactgaattccgcatgaagttccacaagcctgtggttgtggacatg
ttctgctaccgtcgatttggccataatgaaggtgatgagccttcgttcacccagccgaag
atgtacaaggaaatccgcgcccataagaccgttgttcaggtctatggcgatcgcttgatt
gctgaaggcgtgattaccgaaggcgatctcgaaaagatgaaggccgattggcgcgccaat
ctcgagcaggagttcgaggctggccagtcctacaagcctaacaaggctgactggctggat
ggcgtctggtccggtcttcgcgctgccgacaatgccgatgagcagcgtcgcggcaagaca
gccatgccgatgaagtccctgaaggagatcggccgcaagctgtcgaccattcctgatggc
ttcaaagcgcatcgcaccatccagcgcttcatggaaaaccgcgcccagatgatcgagacc
ggcgagggtatcgattgggcgatggccgaggcactggctttcggttcgctggtcgttgaa
ggccacaagatccgcctgtccggtcaggattgcgagcgcggcacattcagccagcgtcat
tcggtgctctacgatcaggaaagcgaagatcgctacattccgctggccaatctggccccc
aatcaggctcgctacgaagtcatcaattcgatgctgtcggaagaggccgtgcttggcttc
gaatacggctattcgctggcacgtccgaatgcgttgaccctgtgggaagcccagttcggt
gacttcgccaacggcgcccaggtggtgttcgaccagttcatctcgtcgggtgaacgcaag
tggcttcgcatgtccggcctcgtctgccttctgccgcatggctatgaaggtcagggaccg
gaacactcttcggctcgtctggagcgctggctgcaaatgtgcgccgaagacaacatgcag
gttgccaacgtcacgacgccgagcaattactaccatatcctgcgccgtcaggtgaaacgc
gacttccgcaagccgctgatcctgatgacgccgaagtcgctgctgcgccacaagcgggcc
cagtctaccctggcggaaatggcaggcgaaagctctttccatcgcctgctgtgggatgat
gccgagatcatcaaggacggtccgatcaagctccagaaggatgccaagatccgccgcgtg
gtgatgtgcagtggcaaagtttattatgacctgctggaagagcgcgaaaagcgtggcatc
gacgatgtctacctgctgcgtatcgaacagctctatccgttcccggccaaggcgctgatc
aatgagctcagccgcttccgcaatgcggaaatggtctggtgccaggaagagccgaagaac
atgggggcctggtccttcatcgatccgtacctggaatgggtgctggcgcatatcgacgcc
aagtatcagcgcgtgcgctataccggccgcccggctgccgcctctccagcgacgggtctg
atgtccaagcatctcgcccaactgcaagccttcctggaggacgcactcggcggctga

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (36)   

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