KEGG T00851: Avi

Agrobacterium vitis S4: Avi_5411

Entry

Avi_5411 CDS T00851

Definition

beta-galactosidase

Orthology

K01190

beta-galactosidase [EC:3.2.1.23]

Organism

avi Agrobacterium vitis S4

Pathway

avi00052	Galactose metabolism
avi00511	Other glycan degradation
avi00600	Sphingolipid metabolism
avi01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:avi00052]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:avi00600]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:avi00511]

SSDB

Motif

Pfam:

Glyco_hydro_2_C Bgal_small_N Glyco_hydro_2_N Glyco_hydro_2 RPE65 BetaGal_dom4_5

Other DBs

NCBI-GI:

222106465

NCBI-GeneID:

7381511

UniProt:

B9K0Z2

Position

2:complement(409732..412758)

AA seq 1008 aa
MTIQTLPAKAHLDWLSDPKVFAVGRLPAHSDHIVYPDEASAKAGSASPLRQSLDGTWKFL
SAISAAERPEGFHHHDFDRSGFGDITVPGAMQLQGHGRPQYVNTQYPWDGHEALALGQAA
EANRVGCYARTFQLDPALAGQRIILTFDGVETAFYVWLNGRFIGYAEDSFTPSRFDITDA
LIDGDNLLAVEVYHRSSGAWLEDQDFWRLSGIMRPVRLEAWRSLHIRDLFVTTDLADDFN
SGSLRLRLALDLAEESPGSLAVTLYDPKGETVLTTSFDAAAEMDIALPVTAPLLWSAEAP
HLYRLLLVVKDSKGATIEAVPQPVGFRRFEMRDGVMRLNGQRIVFRGINRHDFHPRRGRA
LTVEDMLWDVLFFKRNNINAVRTSHYPNRSEFYALCDQHGLYVIDEANLETHGTWSVETL
DPDKVLPGDRDEWRPAVLDRAANMLERDKNHPCVLIWSCGNESYGGSVIADMADWFRDRD
PSRLVHYEGVFHDRRFDARSSDMESRMYARPQDIEDFLRSNPSKPFVSCEYTHAMGNSCG
GMHLYTDLTYRYDQCQGGFIWEYIEQALYGTRPDGSEGLLFGGDFGDRPTDYSFCCDGII
TADRQLTPKVQEIKALYQPVRLIPDAHGVKVINDNLFLNLDAFYLSYHLLKDGVAVDEGR
ADIALSAQEQTYLRLSIPVTQQPGEYALQCSLRERHDRAWAPADHEVAFGEHVWTVAGEK
PNPVSLPLTRAEGSYNLGISDGHSRTLFCRRFGGPVSLVNAAGVEFLERPPLPIFWRAPT
DNDRGAGFGFKFGSWRRASLDQKQASYAYRDGGADYRFALPDSSMQATVSYRYEEDGAIA
VTAHWPGDASLPSLPLFGLTIPMPATFNRFRYYGLGPEENHIDRAHGARLGIYQRAVADN
VTPYVIPQESGNRTGVRWAELFDAEGNTLRFEAVDMPFELGVSPYTAFQLEAAARPYDLP
PANRTIVTLMARQMGVGGDDSWGALPHPQYMIEPGEPLTLTFRMRVMG

NT seq 3027 nt +upstreamnt +downstreamnt
gtgacgatccaaactttgcctgctaaagcacatctcgattggctttccgatcccaaggtc
tttgccgtcgggcggctgcctgcccattccgaccatatcgtctatcccgatgaagcctcc
gccaaggcgggttctgcctcgccgcttcgccagagccttgatggcacctggaagttcctc
tccgccatatcagccgctgagcgcccggaaggtttccaccatcacgatttcgaccgcagc
ggcttcggcgacatcaccgtacccggtgccatgcaattgcaaggccatggccgcccgcaa
tatgtcaacacccaatatccctgggacggccatgaggcgctggcgcttgggcaagccgcc
gaggccaaccgagtcggctgctatgcgaggactttccagcttgaccccgcccttgccgga
cagcggatcatcctcactttcgacggtgtcgagaccgccttctatgtctggctgaatggc
cgttttatcggctatgccgaagacagtttcacgccctcacgcttcgatattaccgacgcg
ctgattgacggcgataacctgctggccgttgaggtctatcatcggtcttccggtgcctgg
cttgaggatcaggatttctggcgtctgtcgggcatcatgcggcctgtccggttggaggcc
tggcggagcctgcatatccgcgatctattcgtcaccaccgatcttgccgatgatttcaac
agtggctccctgcgcttgcggctggccctcgacttggcggaagagagccctggcagtctt
gccgtgacgctctacgatcccaagggtgaaaccgtcctaacaacgtccttcgatgccgca
gccgaaatggatattgccctgcccgtcaccgccccgctgctgtggagcgctgaggcgccg
catctctatcgcctgctgctggtcgtaaaggacagcaagggcgcgacgatcgaggccgtg
ccgcagccggtcggcttccgtcggtttgaaatgcgcgatggggtgatgcgtctcaatggc
cagcgcatcgttttccgtggcatcaacaggcatgatttccatccacgccggggacgcgcc
ctgacagttgaggacatgctctgggatgtgctgttcttcaagcgcaacaatatcaatgcg
gtgcgcaccagccattacccaaaccgcagcgagttctacgcgctctgcgaccagcacggc
ctctatgtcatcgacgaggccaatctggaaactcacggcacatggtcggtcgagacgctg
gacccggacaaagtcctgcccggcgaccgcgacgaatggcgacccgccgtgctcgaccgt
gccgccaatatgctggaacgcgacaagaaccatccttgcgtgctgatctggtcttgcggc
aatgagagctatggcggcagcgtgattgccgatatggccgattggtttagggaccgcgat
ccctcgcgcctcgtccattacgaaggcgtgttccacgaccgccgctttgatgcgcgctcc
agcgacatggaaagccggatgtatgcgcgcccgcaggacatcgaggattttctgcgcagc
aatccatccaagcccttcgtgtcctgcgaatatacccatgcgatgggcaattcctgcggc
ggcatgcatctctataccgacctcacctatcgttatgatcagtgccagggcggctttatc
tgggaatatatcgaacaggctctctacggcacccgcccggatggcagcgaaggcctgcta
tttggcggcgattttggcgaccggccaaccgattacagcttctgctgcgacggcattatc
accgctgaccggcaattgaccccgaaagtccaggaaatcaaggcgctttaccagcctgtc
cggctgatcccggacgcgcacggcgtcaaagtcatcaatgacaacctgttcttgaacctc
gacgctttctatctgtcctatcacctgctgaaggatggtgtcgcggtggacgaagggcga
gccgatattgcgctttcagcccaggaacaaacctatctgcggctgtccatacccgtcacg
cagcagccgggcgaatatgccctgcaatgctccctgcgtgaacgccatgaccgcgcatgg
gcaccggctgaccacgaagtggcgtttggcgaacacgtctggacggtggcaggtgaaaaa
ccgaacccggtttccctccccctcacccgcgccgaaggcagctataatctcggcatttcc
gatggccacagccgcaccttgttctgccgtcgctttggcgggccggtgtcgctggtcaat
gcggcgggcgtggaattcctggaacggccacccctgccgatcttctggcgcgcgccgacc
gacaatgaccggggcgctggcttcggcttcaaattcggcagctggcggcgggcaagcctc
gaccagaaacaagcttcctatgcctatcgtgacggcggggccgattatcgctttgccctg
cctgatagcagcatgcaggccacggtgtcctaccgctatgaggaggacggggcgattgcc
gtcaccgcccattggccgggcgatgccagcctgccgtcgctaccgctgttcggcctgacg
attcccatgccagcaacctttaaccgcttccgttattatggacttggaccggaggaaaat
cacatcgaccgcgcccatggcgcacggcttggcatttaccagcgcgcggtggccgacaat
gtcacgccctatgtcatcccgcaggaatccggcaaccgaaccggcgtgcgctgggcagaa
ctgttcgacgctgagggcaacacactgcgcttcgaggcggtggatatgccgttcgagctg
ggcgtttcgccttatacggctttccagctggaagccgccgcccggccctatgacctgccg
ccagccaaccgtaccattgtcacgctgatggcccggcagatgggcgtcggtggcgacgat
agctggggcgcgctgccgcatcctcaatacatgatcgagccgggtgagcctctgacgctc
accttcaggatgagggtgatggggtga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (34)   

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