| Entry |
|
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| Gene name |
pbpB2
|
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| Definition |
penicillin-binding protein
|
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| Orthology |
| cell division protein FtsI (penicillin-binding protein 3) [EC: 2.4.1.129] |
|
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| Organism |
avi Agrobacterium vitis S4
|
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| Pathway |
| Peptidoglycan biosynthesis |
|
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| Class |
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH: avi00550]
 |
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| SSDB |
    |
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| Motif |
 |
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| Other DBs |
NCBI-GI: NCBI-GeneID: UniProt: |
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| Position |
pAtS4b:complement(33816..35573)
 |
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| AA seq |
585 aa  
MSFLSRIITIRTKAHFSSVARRRSASFGPGKHKGNEARQRILVLMGGFCVLYTVIGARLV
QYGTASPLVTSSISAPGFGIASRPDIVDRNGELLATDLNMVSLYAEPRKIVDIDEAVEKL
STVIKGIDWADTYKKLQSKSAFQWLRRRLTPRQQADILALGIPGIGFRPEKQRFYPGGAT
AAHILGHVNIDNKGLAGMERYIDQQGLADLRAAGLTDNAHLDPVRLSIDLRVQNIVHDVI
AEAMINYKAEAAGAVVLDAETGEILAMASVPDYNPNEPSRTLPDGSVDKEYEKGWFNRMS
NATYEMGSTFKSFTLAMGLDEGKIGLNSVLDASRPIKMGGFTIHDDHGQGRPLTVPEVFQ
YSSNIGTAKIATMVNLKDHQAFLTKLGLLSKMTTELPEVATPTQPRVWKPLNQVTISFGH
GVATTPLQTAVAGAALINGGKLFSPTFLARSPDEADVVVKQVIQPKTSADMRYLFHWNGI
KGSGRNAQVQGFNVGGKTGTADKVINGKYAAHLNFNAYLAGFPIDKPRYVVLTVIDAPLT
GEKGGRLAAYTAAPMAKEVISRSAALLGVQPRFGNDDDPQLLTNY |
|---|
| NT seq |
1758 nt  +upstreamnt +downstreamnt
atgtcgtttctttctcgtatcatcaccattagaacaaaggcgcatttttcgtcggttgcg
cgtcgtcgatcagcatcattcggtcctgggaagcataaaggtaatgaagcgagacaacgc
atccttgttctgatgggggggttctgcgttctctatacggtgattggcgcacgacttgtc
caatatggcactgcatcgcccctggtcacgagttcgatcagtgctcctgggtttggcatt
gcttcacgcccggatatcgtggaccggaacggcgaactccttgccacggacctcaatatg
gtgtcactttatgcggaaccaaggaagatcgttgacattgacgaagccgtggagaagcta
tcgaccgtcatcaaggggatcgactgggccgatacctacaaaaagctgcaatccaaatca
gcgttccagtggctccgccgccgactgacgccgcgccagcaagcagatatcctcgcgctc
ggcatccctggtattgggttccgtcccgagaaacagcgtttctatccgggcggcgcaacg
gcagcccatatccttggacacgtcaacatcgacaataaggggctcgcagggatggagcgc
tatatcgatcagcaaggacttgctgatctgcgtgccgcaggcctgaccgacaacgcccac
ctcgatcctgtgcggctgtccatcgatctaagggtgcagaacatcgtccatgacgtgatc
gccgaggcaatgatcaactacaaagctgaagccgctggggctgttgtgctagacgccgag
acgggggaaatcctcgccatggcatcagtccccgactacaatccaaacgaaccgtctaga
accctccctgacggctctgtcgataaagagtatgaaaaaggctggttcaaccggatgagc
aacgcgacctacgaaatgggatcgacgttcaaaagcttcacgcttgcgatggggttggac
gaggggaaaatcgggcttaattctgtcttggatgcttcgaggccaatcaaaatgggcggt
tttaccattcatgatgaccatggtcagggacgccctctcactgtcccggaggtcttccaa
tattcatcaaatatcggaactgccaagattgcgacaatggtgaatcttaaagaccatcag
gccttcctgaccaagctgggccttctgtcgaagatgacgactgaactgcccgaagttgcc
acccccactcagccacgtgtctggaagccgctcaatcaagtgacgatatccttcggccat
ggcgttgcaaccacaccgctgcaaaccgccgtagcaggggcggcccttattaacggtgga
aagctcttttcaccgaccttcctggccagaagccctgatgaggccgatgtcgtggtgaag
caggtcattcagccgaagaccagtgcagacatgcgatacctcttccactggaacgggatc
aaaggttccggcaggaacgcacaggtccaggggttcaacgttgggggcaaaacgggtacc
gccgacaaggttattaacggtaaatacgcggcgcacctgaacttcaacgcctatctggcc
ggattcccaattgacaagcctagatacgttgtgttgaccgtcatcgacgcaccattaacc
ggggaaaagggaggtaggctagctgcgtacaccgctgccccgatggcgaaggaagtcata
agcagatcggcagcccttcttggtgtacagcctcgcttcgggaacgatgacgatccgcag
ttactaactaactactga |
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