KEGG T00885: Avin

Azotobacter vinelandii DJ: Avin_29760

Entry

Avin_29760 CDS T00885

Gene name

sucB

Definition

dihydrolipoamide succinyltransferase

Orthology

K00658

2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]

Organism

avn Azotobacter vinelandii DJ

Pathway

avn00020	Citrate cycle (TCA cycle)
avn00310	Lysine degradation
avn01100	Metabolic pathways
avn01110	Biosynthesis of secondary metabolites
avn01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:avn00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:avn00310]

SSDB

Motif

Pfam:

2-oxoacid_dh Biotin_lipoyl E3_binding Biotin_lipoyl_2 RnfC_N Peptidase_M23 GCV_H

Other DBs

NCBI-GI:

226945044

NCBI-GeneID:

7761877

UniProt:

C1DM55

Structure

PDB:

1GHJ 1GHK

Position

complement(3077009..3078208)

AA seq 399 aa
MAIDIKAPTFPESIADGTVATWHKKPGEAVKRDELIVDIETDKVVMEVLAEADGVIAEIV
KNEGDTVLSGELLGKLTEGGAATAAPAAAPAPAAAAPAAAEAPILSPAARKIAEENAIAA
DSITGTGKGGRVTKEDAVAAAEAKKSAPAGQPAPAATAAPLFAAGDRVEKRVPMTRLRAK
VAERLVEAQSSMAMLTTFNEVNMKPVMELRAKYKDLFEKTHNGVRLGFMSFFVKAAVEAL
KRQPGVNASIDGNDIVYHGYQDIGVAVSSDRGLVVPVLRNAEFMSLAEIEGGINEFGKKA
KAGKLTIEEMTGGTFTISNGGVFGSLLSTPIVNPPQTAILGMHKIQERPMAVNGQVVILP
MMYLALSYDHRLIDGKEAVTFLVTMKDLLEDPARLLLDV

NT seq 1200 nt +upstreamnt +downstreamnt
atggctatcgatatcaaagccccgactttcccggaatcgatcgcggacggcaccgtcgcc
acctggcacaaaaagcccggcgaagccgtcaagcgtgacgagctgatcgtcgacatcgaa
accgacaaggtcgtgatggaagtgcttgctgaagcggacggcgtgatcgccgagatcgtc
aagaacgaaggcgacaccgtgctcagcggcgaactgctcggcaagctgaccgaaggtggt
gcggccaccgccgctccggctgctgccccggctccggctgccgccgctccggccgctgcc
gaagcgccgatcctgtccccggccgcccgcaagatcgccgaggaaaacgccatcgctgcc
gacagcatcaccggtaccggcaagggcggtcgcgtgaccaaggaagacgcggtcgccgcc
gcggaagccaagaagtccgctcctgccggccagccggcgcccgccgccaccgccgctccg
ctgttcgcggccggcgatcgcgtcgagaagcgcgtgccgatgacccgcctgcgcgccaag
gtcgccgagcgcctggtcgaggcccagtcctccatggccatgctgacgaccttcaacgaa
gtcaacatgaagccggtcatggagctgcgcgccaagtacaaggatctgttcgagaagacc
cacaacggcgtgcgcctgggcttcatgtccttcttcgtcaaggccgctgtcgaagccctg
aagcgccagccgggcgtcaacgcctccatcgacggtaacgacatcgtctaccacggctac
caggacatcggcgtggccgtttccagcgatcgtggtctggtggtgccggtgctgcgcaac
gccgagttcatgagcctggccgagatcgaaggtggcatcaacgagttcggcaagaaggcc
aaggccggcaagctgaccatcgaggaaatgaccggcggcaccttcaccatctccaacggt
ggcgtgttcggttccctgctctcgactccgatcgtcaacccgccgcagaccgccatcctc
ggcatgcacaagatccaggagcgtccgatggccgtcaatggtcaggtcgtcatcctgccg
atgatgtatcttgccctgtcctacgatcaccgtttgatcgatggcaaggaggccgttacc
ttcctggtgaccatgaaggatctcctggaagacccggctcgcctgctgctggacgtctga

All links

Pathway (5)   
   KEGG PATHWAY (5)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
3D Structure (2)   
   PDB (2)   
Protein domain (7)   
   Pfam (7)   
All databases (30)   

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