KEGG   Aeromonas veronii B565: B565_1987
Entry
B565_1987         CDS       T01462                                 
Name
(GenBank) Ribosomal RNA small subunit methyltransferase F
  KO
K11392  16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
Organism
avr  Aeromonas veronii B565
Brite
KEGG Orthology (KO) [BR:avr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:avr03009]
    B565_1987
Enzymes [BR:avr01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.178  16S rRNA (cytosine1407-C5)-methyltransferase
     B565_1987
Ribosome biogenesis [BR:avr03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    B565_1987
SSDB
Motif
Pfam: Methyltr_RsmB-F Methyltr_RsmF_N YebU_pre-PUA_dom Methyltranf_PUA Methyltransf_31 TruB-C_2 Methyltransf_25 POR TRM NSUN5_fdxn-like
Other DBs
NCBI-ProteinID: AEB50022
Position
2226048..2227478
AA seq 476 aa
MHDNTFLPDYFLRHIAAIMPAHLSMDDFVASCRRPLRRSIRVNTLKIAVSDFVALMEPLG
WQLDPVPWCDTGFWLTRSDETVPLGNTAEHLSGLFYIQEASSMLPVMALFASDKIKADGM
LLDAAAAPGSKTTQIAALMNNQGMLVANEFSSSRLKVLSANIQRCGVTNVGMTHFDAKVF
GQWLPETFDAILLDAPCSGEGTVRKDEDALRNWSIESIDEIAAVQQGLLESAFHALKPGG
VLVYSTCTLSEQENQAVCQSLLDKFGDALSFDSLADLFPHAEQACTSEGYLHVWPQIFDS
EGFFVARLRKHHSVPNTMFKPGKLGKFPFAPLPAKEAEPMLREIEANFGVAPQGQLFGRN
DEIWLFPLRFDQVQGKLRFDRIGIKLAETFKKGYRLTHEWALAYGDKASKGVVELDSANA
REFMMGRDVWPEQDAGAGEVIVRYQGHTLGMGKWVGSRVKNALPRELVRDNNLFNA
NT seq 1431 nt   +upstreamnt  +downstreamnt
gtgcacgacaacaccttccttcccgattactttttacgccacattgcggccatcatgccg
gcccatctctcgatggatgactttgtggccagttgtcgacgtccgctgcgccgcagcatt
cgggtcaataccttgaagatagccgtctcggatttcgtcgccctgatggagccactgggt
tggcagctcgaccctgtcccctggtgtgataccggcttctggctgacccgcagtgatgaa
actgtcccacttggcaacaccgccgagcacttgagcgggctcttctacattcaggaagcg
agctccatgctgccggtgatggcactctttgccagcgacaagatcaaagcggatggcatg
ttgctggatgcagcggcggcccccggctccaagaccacccagatagccgccttgatgaac
aatcagggaatgctggttgccaacgagttttccagcagccggttgaaagtgctcagcgcc
aatatccagcgctgcggcgtgaccaatgtgggcatgacccattttgatgccaaggtgttt
ggccagtggttgccggagacattcgatgccatcctgctcgatgccccctgctccggtgaa
ggtacggtgcgcaaggatgaagatgcgctgcgcaactggagcatcgagagcatcgacgag
attgcggcagtgcaacaagggttgcttgagagcgccttccatgccctgaaaccgggtggt
gtgctggtctactccacctgtaccttgagtgagcaggagaatcaggcggtctgccaatcc
ctgctggacaagtttggcgatgccttgagttttgactcgttggcagacctgttcccccat
gcagagcaggcctgtacatccgaaggatacctgcacgtttggccccaaatcttcgacagt
gaaggctttttcgtcgccagattgcgcaagcatcactctgtgcccaacaccatgttcaag
ccgggcaagctgggtaaattcccctttgcgccgcttcctgccaaagaggctgaacccatg
ttgcgcgagattgaagccaactttggggtggcaccgcagggtcagctgtttggccgcaat
gacgagatctggctcttccctctgcggtttgatcaggtgcagggcaagttgcgcttcgat
cgcatcggcatcaagttggccgaaaccttcaagaaaggttatcgcctcactcatgagtgg
gcattggcctatggcgataaagcgagcaagggtgttgtcgagctggatagcgccaatgcg
cgggaattcatgatgggacgggacgtctggccagaacaggatgcgggcgctggcgaggtg
atcgtccgctatcaggggcataccctgggcatggggaaatgggtgggtagtcgggtcaag
aatgccctcccccgcgagctggtgcgtgacaacaatctgttcaatgcgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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