KEGG   Aeromonas veronii B565: B565_3390
Entry
B565_3390         CDS       T01462                                 
Name
(GenBank) 60 kDa chaperonin
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
avr  Aeromonas veronii B565
Pathway
avr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:avr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B565_3390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:avr03019]
    B565_3390
   03110 Chaperones and folding catalysts [BR:avr03110]
    B565_3390
   03029 Mitochondrial biogenesis [BR:avr03029]
    B565_3390
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:avr04147]
    B565_3390
Enzymes [BR:avr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     B565_3390
Messenger RNA biogenesis [BR:avr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     B565_3390
Chaperones and folding catalysts [BR:avr03110]
 Heat shock proteins
  HSP60 / Chaperonin
   B565_3390
Mitochondrial biogenesis [BR:avr03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    B565_3390
Exosome [BR:avr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   B565_3390
  Exosomal proteins of other body fluids (saliva and urine)
   B565_3390
  Exosomal proteins of breast cancer cells
   B565_3390
  Exosomal proteins of colorectal cancer cells
   B565_3390
  Exosomal proteins of bladder cancer cells
   B565_3390
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: AEB51425
Position
complement(3820335..3821969)
AA seq 544 aa
MAAKDVKFGNEARIKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFQNMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVVAAVAELQALSQPCADSNAIAQVGTISANSDEKVGKLIAEAMDKVGRDGVITVEDG
QGLEDELAVVEGMQFDRGYLSPYFINKQETGSVELDDPFILLVDKKVSNIREMLPVLEGV
AKAGKPLLIVAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEVGMELEKATLEDLGRAKRIVITKENTTIIDGVGDAGVIEGRVAQIRQQIEETSSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALV
RVAAKLAGLRGDNEDQNVGIKVALRAMEAPLRQIVINAGEEASVIANAVKNGEGNFGYNA
YSEQYGDMLAMGILDPTKVTRSALQFASSIAGLMITTECMVTELPKKDTPAMPDMGGMGG
MGMM
NT seq 1635 nt   +upstreamnt  +downstreamnt
atggcagctaaagacgttaagtttggtaacgaagcccgcatcaagatgctggaaggcgta
aacatcctggctgatgccgtcaaggttactctgggcccgaaaggccgcaacgtggtgctg
gacaagtccttcggcgccccgaccatcactaaagatggtgtttctgttgcgcgcgaaatt
gagctggaagacaagttccagaacatgggcgcccagatggtcaaggaagtggcttccaag
gcgaacgatgccgccggtgacggtaccactactgcaaccgttctggctcaggccatcgtt
aacgaaggtctgaaagccgttgccgccggtatgaatccgatggatctgaagcgcggtatc
gacaaagccgttgtggctgctgttgccgagctgcaagcgctgtcccagccgtgcgctgac
agcaatgctatcgctcaggtgggcaccatctccgccaactccgacgaaaaagtgggcaag
ctgattgctgaagccatggacaaagtgggtcgcgatggcgtcatcaccgttgaagatggt
cagggtctggaagatgagctggcagttgttgaaggtatgcagttcgaccgcggctacctg
tccccctatttcatcaacaagcaagagaccggttctgttgaactggacgacccgttcatc
ctgctggttgacaagaaagtctccaacatccgcgaaatgctgcctgtgctggaaggcgtt
gccaaagctggcaagccgctgctgattgttgctgaagacgtggaaggcgaagccctggcg
actctggtggtcaacaccatgcgcggtatcgtgaaagtggctgccgtcaaggcgcctggc
ttcggtgatcgtcgcaaggccatgctgcaggatatcgctgtactgactggcggtaccgtc
atctctgaagaagttggcatggagctggaaaaagcgactctggaagatctgggtcgtgcc
aagcgcatcgtcatcaccaaagagaacaccaccatcatcgatggcgtgggtgatgccggt
gtgatcgaaggccgtgttgcccagatccgtcagcagatcgaagagacctcttccgactac
gatcgtgagaagctgcaagagcgcgtagccaagctggctggcggtgttgccgtgatcaag
gttggcgcagccaccgaagtcgagatgaaagagaagaaagcacgcgttgaagatgccctg
cacgctacccgcgccgctgttgaagaaggcgtggttgccggtggtggtgttgcgctggtt
cgcgttgctgccaaactggcgggtctgcgcggtgacaacgaagaccagaacgtcggtatc
aaggttgccctgcgcgccatggaagccccgctgcgtcaaatcgtcatcaacgccggtgag
gaagcctccgtcattgccaacgcagtgaagaacggcgaaggtaacttcggttacaacgct
tacagcgaacagtatggcgacatgctggccatgggcatcctggatccgaccaaggtaacc
cgttccgccctgcagtttgcctcttcaatcgctggtctgatgatcaccaccgagtgcatg
gtcaccgaactgccgaagaaagatacccctgccatgcctgacatgggcggcatgggtggc
atgggcatgatgtaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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