KEGG   Aerococcus viridans: AWM76_07550
Entry
AWM76_07550       CDS       T04270                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
avs  Aerococcus viridans
Pathway
avs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:avs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AWM76_07550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:avs03019]
    AWM76_07550
   03016 Transfer RNA biogenesis [BR:avs03016]
    AWM76_07550
Enzymes [BR:avs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     AWM76_07550
Messenger RNA biogenesis [BR:avs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     AWM76_07550
Transfer RNA biogenesis [BR:avs03016]
 Prokaryotic type
  tRNA degradation factors
   AWM76_07550
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 SPATA25 S1_2 TrkA_C TRCF Hemerythrin
Other DBs
NCBI-ProteinID: AMC01415
Position
complement(1588624..1590732)
AA seq 702 aa
MEEKQVFKMNWAGRPLSIEYGQVAKQANAAVLVRYGDTVVLTAVVGAKEAKPGQDFFPLQ
VNYEEKMYSVGKIPGGYIKREGRPSEHATLTARLIDRPIRPMFDEGFTNEVQVINTVLSV
DPDCSPEMAAMFGSSAALTISDIPFDGPIAGVNVGRVNGDFVINPTVEQQAQSDLELIVA
GSKDAINMVESSAAELSETEMLEALMFGHTSIRELCYFQDEIREKIGQEKMDVQLNTPDN
VLVAEVTAQYNQQMVEAIQTFDKLEREENIEAVKAAIIDHYSELYAEHEDVVTLMDQVRQ
IANQLEYKEVRRLITDDKVRPDGRKIDEIRPLASEVGLLPRTHGSGLFTRGQTQALSVAT
LAPLSEEQRIDGLAGDVTQRFMHHYNFPQYSVGSTGRYGSPGRREIGHGALGYRALNEVL
PSEEDFPYAIRLVAEVLESNGSSSQASICAGTLALMDAGVPIKAPVAGIAMGLIMDEDEE
NYTVLTDIQGLEDHLGDMDFKVAGTENGITALQMDIKIKGITEQILREALDQAHKARVEI
LGHLATAIDAPRAELSPYAPKIEQMQIDPDDIKVVIGKGGDTINKIIDETGVKIDIDQEG
GVNIASDNAAMIKRAKEIIAELTLKVQAGEVYVGTVKRIEKFGAFVEIAKGKDGLVHISQ
LQEERTNNVEDVVSMDEKVRVKVTEIDNRGRINLTMKGLDAE
NT seq 2109 nt   +upstreamnt  +downstreamnt
atggaagaaaagcaagtgtttaaaatgaattgggccggccgcccattatcgatcgaatac
ggtcaggtagctaaacaagccaatgcagcggtattggttcgttacggagatactgtcgta
ttaactgccgtagtaggggcaaaagaagctaagccagggcaagacttcttcccattacaa
gtaaactatgaagaaaaaatgtactcagtagggaaaattcctggtggttacattaaacgt
gaaggtcgcccaagcgaacatgcaacattaactgcacgtttaattgatcgtccaatccgt
ccaatgtttgacgaagggtttaccaatgaagtgcaagtgattaatactgttttatcagta
gacccagactgttcaccagaaatggccgcaatgtttggttcatcagcagccttaacgatc
tctgatattccttttgacggtccaattgcaggggttaatgtgggtcgtgtgaatggtgat
ttcgtgatcaacccaactgtagaacaacaagcgcaatctgatttagagttaattgttgct
ggttctaaagatgccatcaacatggtagaatcatcagctgctgaattatctgaaacagaa
atgcttgaagccctaatgtttggtcacacatcaattcgtgaattgtgctacttccaagat
gaaatccgggaaaaaattggccaagaaaaaatggacgtccaattaaatacaccggacaac
gtgttggttgctgaagtaacagcacaatacaatcaacaaatggttgaagcaatccaaacg
tttgacaagttggaacgtgaagaaaatatcgaagcggttaaagcagcgattatcgaccac
tacagcgaattatatgcagaacatgaagatgttgtgaccttaatggaccaagtgcgtcaa
attgcgaaccaattagaatataaagaagttcgtcgtttaattactgatgataaagttcgt
cctgatggtcgtaaaattgatgaaatccgtccattagcttcagaagttggcttattacca
cgtacacacggttctggtttattcactcgtggacaaactcaagccttatcagtagcgaca
ttagcacccttatctgaagaacaacgtattgatggtttagctggtgatgttacccaacgt
ttcatgcaccactacaacttccctcaatactcagtaggttcaaccggccgttacggttct
cctggtcgtcgtgaaattggtcacggtgctttaggttaccgcgccttaaatgaagtattg
ccaagtgaagaagacttcccgtatgcaattcgtttagttgctgaagtattagaatctaac
ggttcatcatcacaagcatctatttgtgcgggtactttagcgcttatggacgcaggtgtg
ccaattaaagccccagttgctggtatcgcaatgggtctaatcatggatgaagacgaagaa
aactatacagtcttaactgatatccaaggtctagaagaccacttgggtgacatggacttt
aaagtagccggtacagaaaacggtattactgctttacaaatggatatcaagattaaaggg
atcacggaacaaattctacgtgaagctttagaccaagcccataaagcgcgggttgaaatc
ttgggtcacttagcaactgcaattgacgcaccacgtgctgaattaagtccatatgcacca
aaaattgagcaaatgcaaattgatccagatgacattaaagtggttatcggtaaaggtggg
gataccatcaacaaaattatcgatgaaacaggtgttaaaattgatatcgatcaagaaggt
ggcgtgaatatcgcttcagataatgcggcaatgatcaaacgcgcgaaagaaattattgct
gaattgaccttgaaagttcaagcaggtgaagtgtatgtaggaactgtcaaacgcattgaa
aaatttggtgcctttgttgagatcgctaaaggtaaagatggtttagtgcatatttctcaa
ctgcaagaagaacgaaccaataatgtggaagacgtagtgtcaatggacgaaaaagtccgc
gtaaaagtgacagaaatcgataaccgtggtcgtatcaacttgacaatgaaaggcttagac
gccgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (20)   

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