KEGG T01732: Awo

Acetobacterium woodii: Awo_c26960

Entry

Awo_c26960 CDS T01732

Definition

recombinase D (EC:3.1.11.5)

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

awo Acetobacterium woodii

Pathway

awo03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:awo03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 HHH_5 AAA_11 HHH_2 Viral_helicase1 PIF1 HHH Helicase_RecD PhoH UvrD_C HHH_8 T2SE DUF2075 AAA_28 AAA_23 AAA_22 AAA_17 AAA_18 NTPase_1 AAA_12 HHH_3 RNA_pol_A_CTD UvrD-helicase DUF258 cobW AAA_29 Arch_ATPase SRP54 DEAD PRK MobB AAA_16 5_3_exonuc AAA UPF0079 TrwB_AAD_bind Mg_chelatase

Other DBs

NCBI-GI:

379012526

NCBI-GeneID:

11872709

UniProt:

H6LFG2

Position

complement(3153482..3155695)

AA seq 737 aa
MESIKGTVEHIVFRNSNNGYTVAHFDIDGDLVTVVGNFDELNHGEYLKLTGYWTEHKNYG
DQFCMETYAMEIPTSSEGIIRYLASGILPGIGEKTAKAIVARFGEETLDILDNNPERLSE
IKGIGKKTLAGIKEIYHEQREVRQIMIQIQDYGISANWAMKLYKTYKFDTISVLLNNPYQ
MIEDIRGIGFKIADQIANHLGFELNSPGRILAGINYALGECYNRGNTYMTETELIETSSR
ILGVDEDEINAQLGELVLLGRIIQEEIADQRVYYPRNLYEAEDNTALSMARISQLSYKIA
DVDIDTKIKNYERDMSITLDNKQREAIAAAMDNGVIVITGGPGTGKTTIINGIVRIFKDL
GLKTVLAAPTGRAAKRITETTGNEAKTIHRLLEYEYSQDDDFPSFSKDETNQLEVDAIIV
DESSMIDILLMDSLLMAVQPGTRLILVGDADQLPSVGPGNVLKDIIESGAIKVLSLERIY
RQSEESMISVNAYEINHGRMPDINNQSDFLFLNKNDGDKLLRDILELVTSRLPIAKGFDS
LHDIQVISPMKNGKVGVINLNRELQAVLNPPTETAAQREFGMVIYREGDKVMQIKNNYRI
KWEDTFSREEGEGIYNGDIGILESISNREKSFAILFNDGKRVLYDFDQMDEITHAYAMTV
HKSQGSEFPVVVMPIVGGPPLFLNRKLLYTAVTRAKKLLILMGNQYVFRQMIKSSAAQER
QTALKDRIIAYIKHPMA

NT seq 2214 nt +upstreamnt +downstreamnt
atggaaagtattaagggaacggtggaacacatcgtctttagaaatagcaataacggctac
accgtagctcattttgacatcgatggcgatctggttaccgtggttggcaatttcgacgaa
ttgaatcatggtgaataccttaaactgaccggttactggaccgaacacaaaaactatggc
gatcaattttgcatggaaacgtatgcgatggaaatacccacctccagcgaagggatcatc
cgctatttagcatcagggattttacccggaattggagagaaaacggccaaagcgattgtc
gcccgatttggtgaagaaaccctggatatcctggataacaacccggaacgcttgtcggaa
ataaaagggattggcaaaaaaactttggctggcataaaagaaatttatcacgaacaacgg
gaagtccggcagatcatgattcagattcaagactatgggatttcagccaactgggcgatg
aaactttacaaaacctataaatttgacacgatttcagtgctgctcaataatccttaccaa
atgattgaggatatcagagggattggctttaaaatagccgatcagattgcgaatcatctg
ggttttgaactcaatagccccggtcggattttggccggaatcaattatgctcttggcgaa
tgttacaatcgcggtaatacctatatgaccgaaaccgaactgattgaaaccagctcccgg
attttaggggtggatgaagacgaaattaacgcccaactgggggaactggtgttgctgggg
cgaatcattcaggaagaaatcgccgatcaacgggtgtattatccccggaatctttacgaa
gcagaggataatacggccctttcgatggcgagaatcagccagttaagttataaaattgcc
gatgttgacatcgatacaaaaataaaaaactacgaacgtgatatgtcaattacgttggat
aataaacaacgggaagcaattgcggccgcgatggataatggcgtgattgtgattaccggc
ggaccgggaaccgggaaaaccaccattattaatggaatcgtgcggatttttaaagatctg
gggttaaaaacggttttagccgcgccaactggacgggcggccaaacgaattaccgagacc
accggcaatgaggcaaaaaccattcatcgtttgctggaatacgaatacagtcaggatgac
gattttcccagtttcagcaaggacgaaaccaatcaacttgaggttgatgccattattgtt
gatgaatcgtcgatgattgatatcttattgatggatagtttgctgatggccgtgcaaccc
gggacacgacttattttggttggcgatgccgatcagttgccgtcggtggggccgggcaat
gttttaaaagacatcatcgaaagtggtgctattaaggtgttaagtctggagcgcatttat
cgccaatccgaggaaagcatgatttcggttaacgcctatgaaattaaccacggacggatg
ccggatattaataaccagagtgactttttgtttcttaataaaaacgacggggataaattg
ctccgggatattctcgagttggtgaccagccggttgccgatcgccaaaggatttgacagc
ttacatgacattcaggtgatttcgccgatgaaaaacggaaaagttggggtgatcaacctc
aatcgcgagttgcaagcggtgttaaacccgcccaccgagaccgccgcccaacgtgagttt
ggaatggtgatttatcgggagggcgataaggtgatgcagattaaaaataactatcggata
aaatgggaagatacttttagcagagaagaaggcgaggggatttataacggtgatatcggg
attctggaaagtatcagcaatcgggaaaaatcgtttgcgattttatttaatgacggcaaa
cgggtgctctacgactttgaccagatggatgaaataacccacgcgtatgcaatgacggtg
cataaaagccagggcagtgagtttcccgtggtggtaatgccgatcgttggcggcccgccg
ctgtttcttaatcgcaaactgttatatactgcggtgacgcgggctaaaaaactgctgatc
ctgatgggcaaccaatacgtctttcgtcagatgatcaaatcgtcagcggctcaggagcgc
caaaccgctctcaaagaccggattatcgcctatatcaaacacccgatggcgtaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (40)   
   Pfam (40)   
All databases (49)   

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