KEGG   Amphibacillus xylanus: AXY_15130
Entry
AXY_15130         CDS       T02266                                 
Symbol
topA
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
axl  Amphibacillus xylanus
Brite
KEGG Orthology (KO) [BR:axl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:axl03032]
    AXY_15130 (topA)
   03400 DNA repair and recombination proteins [BR:axl03400]
    AXY_15130 (topA)
Enzymes [BR:axl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     AXY_15130 (topA)
DNA replication proteins [BR:axl03032]
 Prokaryotic type
  DNA Topoisomerases
   AXY_15130 (topA)
DNA repair and recombination proteins [BR:axl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AXY_15130 (topA)
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim RNA_POL_M_15KD Toprim_4 Toprim_3 Toprim_2
Other DBs
NCBI-ProteinID: BAM47645
UniProt: K0IYQ0
Position
complement(1552777..1554855)
AA seq 692 aa
MSDYLVIVESPAKAKTIERYLGKKYTVKASMGHVRDLPKSKMGIDFENNYQPNYITIRGK
GPVLKELRAAAKKAKKIYLAADPDREGEAIAWHLAHNLNVDPNSECRVVFNEITKEAVKD
SFKSPRPINMNLVDAQQGRRILDRLVGYNISPLLWKKVKKGLSAGRVQSVAVKMIIDREN
EIKNFKPEEYWSINGHFITNNEKFEGYFHRLDGAKQDLPNKASVDQVLERLTENKFKVTK
VTKKERKRNPALPFTTSSLQQEAARKLNFRARKTMMLAQQLYEGIDLGRSEGGITGLITY
MRTDSTRISETARSEASNYITDQFGSEYLGSAQKTKNSQQAQDAHEAIRPTSAFREPSKV
KDKLSRDQYRLYKLIWDRFIASQMAPAVMDTMTVQLEQNGVQFRATGSKIKFNGFMKIYI
EGNDDNVKEEHKLLPALEEGMEVDVDKITPNQHFTQPPPRYTEARLVKTMEENGIGRPST
YAPTLDTIQRRGYVTLDNKRFVPTELGEIVINLILEFFPKIIDIDFTAKMENDLDEIESG
AIDWIAVIDNFYQDFEKKLKVAEKEMENVEIKDEPAGEDCEKCGHEMVYKMGRFGKFMAC
SNFPDCRNTKAILKEIGVECPKCKKGQIVERKSKKRRTFYGCDQFPECDYVSWDKPISRQ
CPTCQEQLIEKKSKKGVTVQCSSCSYKEETQN
NT seq 2079 nt   +upstreamnt  +downstreamnt
atgtcagattatttagtaatcgtggagtcacctgcaaaagctaaaactattgaacgctat
ctcggtaagaaatatactgtaaaagcttcgatggggcatgtgcgtgacttgccaaaaagt
aaaatgggtattgactttgaaaataattatcaaccgaattatataactatccgtggaaaa
ggtcctgttttaaaggaattgagagcagccgcaaaaaaagccaaaaagatatatttagca
gctgaccccgatcgcgagggtgaagcaattgcttggcatttagctcataacttaaatgtt
gatccgaattctgaatgtcgcgtcgtatttaatgagattacaaaagaagcagtcaaggat
tcttttaaatcacctcgacctattaatatgaatttagtcgatgcacaacaaggtcgacga
attttagatcgtttagttggttataacattagtcctttactatggaaaaaagtaaaaaaa
ggcttaagtgcaggacgtgtacaatctgtagcggtcaaaatgattatcgatcgagaaaat
gaaattaagaatttcaaaccagaagagtactggtcgattaatggtcactttattactaat
aatgaaaagtttgaagggtacttccatcgtctagatggggcgaagcaagatttacccaat
aaagcatcagttgatcaagtattagagcgacttactgagaacaaatttaaagtcactaag
gttactaagaaggaaagaaaacgaaatcctgctttaccttttacaacttcatcattacag
caagaagcggctagaaagctaaatttcagagctcgtaaaacaatgatgctagcacaacaa
ctatatgaaggaattgacttaggcagaagtgaaggtggcattactggtttgatcacatat
atgcgtacagattcaaccagaatttcagaaacagcgcgttctgaagcaagcaattatatc
actgaccaatttggttctgaatatttaggctctgcccaaaaaacgaagaattcacaacaa
gctcaggatgctcacgaagcaattcgtccaacttcagctttccgtgaaccgagtaaggtg
aaagataaattatccagagatcaatatcgactttacaaattaatctgggatcgatttatc
gcaagtcaaatggcacctgctgttatggatacgatgactgtccaactcgaacaaaatggc
gtgcaattccgagcgacaggttcaaaaatcaaatttaatggatttatgaagatctatatt
gaaggtaatgacgataatgttaaagaagaacataaattattaccagcattagaagagggc
atggaagtcgatgttgataaaattacaccaaatcaacattttactcaaccacctccacga
tatactgaggctcgtttagtaaaaacgatggaggaaaacggtattggtcgaccgtcgact
tatgcaccgacattagataccattcaaagacgtggctatgtcacattagataataaacgt
tttgtgccaactgaattaggcgagatcgtgatcaatttaattcttgagtttttccctaaa
attattgatattgatttcacggcgaaaatggaaaatgatcttgatgaaattgaatcaggg
gcaatcgattggattgcggtaattgataatttctatcaagattttgaaaagaaattaaaa
gttgctgagaaagaaatggaaaatgtcgaaataaaagatgaacctgctggtgaagactgt
gagaaatgcggtcatgagatggtctataaaatgggtcgattcggtaagttcatggcttgt
tctaacttccctgattgtcgtaatacgaaagcaattttaaaagagattggcgtagaatgt
ccaaaatgtaaaaaaggtcaaattgtcgagcgtaaatcgaaaaagagaaggactttctat
ggatgtgatcagttcccagaatgtgattatgtatcgtgggacaaaccaatctctagacaa
tgtccgacctgtcaagagcagttaattgaaaagaaatcgaaaaaaggcgttacggttcaa
tgtagttcttgtagttataaggaagaaacacagaattag

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