KEGG   Achromobacter xylosoxidans NCTC10807: ERS451415_01895
Entry
ERS451415_01895   CDS       T04522                                 
Symbol
dnaE_1
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
axx  Achromobacter xylosoxidans NCTC10807
Pathway
axx03030  DNA replication
axx03430  Mismatch repair
axx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:axx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ERS451415_01895 (dnaE_1)
   03430 Mismatch repair
    ERS451415_01895 (dnaE_1)
   03440 Homologous recombination
    ERS451415_01895 (dnaE_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:axx03032]
    ERS451415_01895 (dnaE_1)
   03400 DNA repair and recombination proteins [BR:axx03400]
    ERS451415_01895 (dnaE_1)
Enzymes [BR:axx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ERS451415_01895 (dnaE_1)
DNA replication proteins [BR:axx03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ERS451415_01895 (dnaE_1)
DNA repair and recombination proteins [BR:axx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ERS451415_01895 (dnaE_1)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DNA_pol_IIIA_C tRNA_anti_2 RecG_wedge
Other DBs
NCBI-ProteinID: CKH15091
Position
1:2072680..2076108
AA seq 1142 aa
MVDGIVRIPDLIKRVAKLGQPAVALTDLSNLFGLIKFYKGARGAGIKPIAGCDVWLSNDD
DPAKPFRVLLLVRNHQGYLNLCELLSRAFLTNQGKGRAEIRREWLQGQDGLIVLSGGRGG
DVGQALDAGNAVSALALARQWAHMFPGSYYIELQRAGMDGDEAYTQAAMRLAAEAGLPVV
ATHPVQFLDEYEFQAHEARVCIAEGEILANPRRVRRFSKEQYLLSSEEMARRFADVPSAL
ANTVEIAKRCNLSLVLGKPRLPNFPTPDGVSLDDYLVQLSEEGLEKRMAFLFPDEAERAS
KREQYYERLRWECKTIIQMGFPGYFLIVQDFINWGKNNGVPVGPGRGSGAGSLVAYALGI
TDLDPIRYDLLFERFLNPERVSMPDFDIDFCQDNRERVIDYVKEKYGRAAVSQIATFGTL
GAKAVVRDAGRVLDMPYMFCDGLSKLIPFNPMDPWTLERTLKDEPAFKDRYEQEEEVRAL
VDLAKPLEGLTRNIGMHAGGVLIAPGKLTDFCPLYCQPGQENSAVSQFDKDDVEAAGLVK
FDFLGLRNLTILDWAVRYVRQFNEDKRDFDVMALSLDDPAAYKILCDANTTAVFQLESRG
MKELLKKLRPNTFEDIIAMLALYRPGPLESGMVDDFVNRKHGRAAVDYFHNDLESTLKST
YGVIVYQEQVMLISQIIGGYSLGGADLLRRAMGKKKPEEMAKHRELFEKGAKEKGHDPDL
AVKLFDLMEKFAGYGFNKSHSAAYALISYQTAWLKAYHPTEFLAATMSSDMDDTDKVQIF
CRDAQDNGVEVLPPDVNFSGYRFEPVADKHTEKGKPPRTMRYGLGAVKGTGQGAVEDILR
ARKEGGPFQNLFDFCRRVSKHAVNRRTIEALIKAGAFDTIEPNRAAMLASVPTAMEAAEQ
AARSANQSSLFGDDSSDVVAGELAKVAPWDLHKKLTEEKSALGYYYSGHLFDAWRDEVRQ
IVPMQLARVEPQRDLQWMCGVLASVRVMMTRRGKMVFAVLDDGTAQVEISVFNELYEKHR
NRLREDQLVIVQGKVSNDDYSGGMRIVAEQLYDLQLAREARAKSLRVKLNGGADAARLRQ
MLNPFRAEPENGIPGVPVDIVYTKNNFLCTVRLGEEWRVRMADTLLENLNAWTKPNGVEV
TY
NT seq 3429 nt   +upstreamnt  +downstreamnt
gtggtggatggcatcgtgcgcattcccgacctcatcaagcgtgtcgccaagctgggccag
ccggcagtcgcgctgaccgatctgtcgaacctgttcggcctgatcaagttctacaagggc
gcgcgcggcgcgggcatcaagcccatcgccggctgtgacgtctggctgagcaacgacgac
gatcccgccaagccgttccgcgtgttgctgctggtgcgcaaccaccagggctacctgaac
ctgtgcgaactgctgtcgcgcgcgttcctgaccaaccagggcaagggccgggccgagatc
cgccgtgaatggctgcagggccaggacggcctgatcgtgctgtcgggtggccgcggcggc
gacgtcggccaggcgctggacgccggcaacgcggtgtcggcgctggccttggcgcgccag
tgggcgcatatgttcccgggcagctactacatcgagctgcaacgtgccggcatggacggc
gacgaggcctacacccaggccgccatgcgcctggcggccgaggccggcctgccggtggtg
gccacgcacccggtgcagttcctggacgaatacgaattccaggcgcacgaggcgcgcgtc
tgcatcgccgaaggcgagatcctggccaacccgcgccgcgtgcgccgcttcagcaaggaa
cagtacctgctcagttccgaggaaatggcgcgtcgctttgccgacgtgccctcggcgctg
gccaatacggtcgagatcgccaagcgctgcaacctcagcctggtgctgggcaagccgcgc
ctgcccaacttccccacgcccgacggtgtgtcgctggacgactacctggtgcagctgtcc
gaagagggcctggaaaagcgcatggccttcctgttcccggatgaagccgagcgcgcgtcc
aagcgcgagcagtactacgaacgcctgcgctgggaatgcaagaccatcatccagatgggc
ttcccgggctacttcctgatcgtgcaggacttcatcaactggggcaagaacaacggcgtg
ccggtcggcccgggccggggttcgggcgccggttcgctggtggcgtacgcgctcggcatc
accgacctggatccgatccgctacgacttgctgttcgagcgcttcctgaatcccgagcgg
gtctcgatgcccgacttcgatatcgacttctgccaggacaaccgcgaacgcgtcatcgac
tacgtcaaggaaaaatacggtcgcgccgccgtgagccagatcgccaccttcggcacgctg
ggcgccaaggccgtggtgcgcgacgccggccgggtgctggacatgccctacatgttctgc
gacggcctgtccaagctgatcccgttcaacccgatggacccctggacgctcgagcgcacc
ctgaaggacgaaccggccttcaaggaccgctacgagcaggaagaggaagtgcgcgcgctg
gtcgacctggccaagccgctcgaaggcctgacgcgcaacatcggcatgcacgccggcggc
gtgctgatcgcgcccggcaagctcaccgacttctgcccgctgtattgccagccggggcag
gagaacagcgcggtgtcgcagttcgacaaggacgacgtcgaagccgccggcctggtcaag
ttcgacttcctgggcctgcgcaacctgaccatcctggactgggccgtgcgctacgtgcgc
cagttcaacgaggacaagcgcgacttcgacgtcatggcgctcagcctcgacgatccggcc
gcctacaagatcctgtgcgacgccaacaccaccgcggtgttccagctggaatcgcgcggc
atgaaggagctgctcaagaagctgcggcccaacaccttcgaagacatcatcgccatgctg
gccctgtaccgtccggggccgctggaatcgggcatggtggacgacttcgtcaaccgcaag
cacggccgcgccgcggtggactacttccacaacgatctggagagcacgctcaagagcacc
tacggggtcatcgtctaccaggaacaggtgatgctgatctcgcagatcatcggcggctac
tcgctgggcggcgccgacctgctgcgccgcgccatgggcaagaaaaagcccgaggaaatg
gccaagcaccgcgagctgttcgagaagggcgccaaggaaaagggccacgaccccgacctc
gcggtcaagctgttcgacctgatggagaagttcgcgggctacggcttcaacaagtcgcac
tcggccgcgtacgcgctgatctcctaccagaccgcctggctcaaggcctaccacccgacc
gagttcctggccgccaccatgtcctccgacatggacgacaccgacaaggtccagatcttc
tgccgcgacgcccaggacaacggcgtcgaggtgctgccgcccgacgtcaatttctcgggc
taccgcttcgaacccgtggctgacaagcacaccgaaaagggcaagccgccgcgcaccatg
cgctacggcctgggggcggtcaagggcacggggcagggcgcggtcgaggacatcctgcgc
gcccgcaaggaaggcggcccgttccagaacctgttcgacttctgtcgccgcgtcagcaag
cacgcggtcaaccgccgcaccatcgaggccctgatcaaggccggcgccttcgacaccatc
gaacccaatcgcgccgccatgctggcctcggtgcccaccgccatggaagcggccgagcag
gccgcgcgcagcgccaaccagtcctcgctgttcggcgacgacagcagcgacgtggtggcc
ggcgaactggccaaggtcgcgccgtgggacctgcacaagaagctgaccgaggaaaaatcg
gcgctgggctactactacagcggccacctgttcgacgcctggcgcgacgaagtgcgccag
atcgtgccgatgcagctggcgcgggtcgagccgcagcgcgacctgcaatggatgtgcggg
gtgctggccagcgtgcgcgtcatgatgacccgtcgcggcaagatggtgttcgcggtgctg
gacgacggcaccgcgcaggtcgagatctcggtgttcaacgagctctacgaaaagcaccgc
aaccgcctgcgcgaagaccaactggtcattgtccagggcaaggtcagcaacgacgactac
tcgggcggcatgcgcatcgtcgccgagcagctctacgacctgcaactggcgcgcgaggcg
cgcgccaagtcgctgcgcgtcaagctcaacggcggcgcggacgccgcgcgcctgcgccag
atgctcaacccgttccgcgccgagcccgagaacggcatccccggcgtgccggtggacatc
gtctacaccaagaacaatttcctgtgcacggtgcggctgggcgaggaatggcgggtccgc
atggccgataccctgctcgaaaacctgaatgcctggaccaagcccaacggcgtggaggtc
acctactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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