KEGG   Ilumatobacter coccineus: YM304_23850Help
Entry
YM304_23850       CDS       T02501                                 

Definition
putative DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
aym  Ilumatobacter coccineus
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:aym00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    YM304_23850
Enzymes [BR:aym01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     YM304_23850
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     YM304_23850
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
2657050..2657844
Genome map
AA seq 264 aa AA seqDB search
MPEGLEAEIWRVAASPLVGRTVSDVWVDERVASVGLRDAVVGAEIAGVDRVGKVLVVEMQ
TSTGRTKLGLHFGMTGRLVVDGDAAIERLEYASGADRPSWDRLRLWTERDHRPADVPSLR
LNDPRRLGRISLDADLTQLGPDALTLTSAELRRRLSGRRVAIKTALLDQSVVAGLGNLCV
DEVLWTAGIAPHRPSDRLDAAEVTAIARACRRRLPVMLRRGGSTMGELTPELRRVAGDCP
LDGTPLTRSKVGGRTTVWCPHHQL
NT seq 795 nt NT seq  +upstreamnt  +downstreamnt
gtgcctgaggggctcgaagccgagatctggcgggtggcggcgtcaccgctggtggggcgc
acggtgtcggacgtgtgggtcgacgaacgcgtggcctcggtcggacttcgcgacgccgtc
gtcggcgccgagatcgccggcgtcgatcgtgtcggcaaagtgctggtcgtcgagatgcag
acatcgacgggccgaacgaagctggggctccacttcggcatgaccggccgcctcgtcgtc
gacggcgacgcagccatcgaacgtctcgagtacgcgtcgggcgcggatcggccgtcgtgg
gacaggctgcgcctctggaccgaacgcgatcaccgacccgccgacgtcccgtcgctgcgc
ctcaacgatccgcgacgtctcggccgcatcagcctcgacgccgacctgacgcaactcgga
ccagacgcgctgacgctcaccagcgccgagctgcgccgacgcctgagcggacggcgggtg
gcgatcaagacggccctcctcgaccagtcggtggtggccggactcggcaacctgtgcgtc
gacgaggtgctctggacggctggcattgcgccacaccggccgtccgatcgcctcgatgcg
gccgaggtgacggcgatcgcgcgggcctgccgccgacgcctcccggtgatgctgcggcgc
ggcgggtcgaccatgggcgaattgacgcccgaactgcgtcgagttgcgggcgattgtccg
ctcgacggcacgccgctgacccgctcgaaggtcggcggacggaccaccgtctggtgtccg
catcaccagctctga

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