KEGG   Aster yellows witches'-broom phytoplasma AYWB: AYWB_442
Entry
AYWB_442          CDS       T00314                                 
Symbol
topA
Name
(GenBank) DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
ayw  Aster yellows witches'-broom phytoplasma AYWB
Brite
KEGG Orthology (KO) [BR:ayw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ayw03032]
    AYWB_442 (topA)
   03400 DNA repair and recombination proteins [BR:ayw03400]
    AYWB_442 (topA)
Enzymes [BR:ayw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     AYWB_442 (topA)
DNA replication proteins [BR:ayw03032]
 Prokaryotic type
  DNA Topoisomerases
   AYWB_442 (topA)
DNA repair and recombination proteins [BR:ayw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AYWB_442 (topA)
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim Toprim_4
Other DBs
NCBI-ProteinID: ABC65559
UniProt: Q2NJ34
Position
complement(455542..457485)
AA seq 647 aa
MKSKVIIVESPTKTKTLSRFLNDDFLILSSKGHIRDLSLKGKDRMGIDIEKGFIPKYSII
KEKDNIVETLIQKTKGKEVLLATDPDREGEAIAWHLSQILNLDSQKTNRIVFREITKEAV
LKALQQPRKINELLVFSQETRRMLDRIIGFKLSRLVRRLKSQSAGRVQSVALKLIVDLEE
KIKAFVPEEYYIITAFFKDFQAEYQNPYKGKIKAQEAFTIVQQIKDKSFLVKELKQQETK
KFPKPPFITSTLQQEAIKSLNMTSNQVMRVAQKLYEGVDILGESKGLITYMRTDSQRLAD
IFVKDAQKLIKKQYGEEYLGTYKNSKTPQSQDAHEAIRPTDLSKTPESLAPHLDKYENKL
YKLIYQRTLASLMTPAIFQKTQVFFEVANHLFLTESLIKTFDGYQKLLQDGDKDKIIPSF
KSNETYLPQEIQNLQKFTNPPSRFSEATLIKTLEKLNIGRPSTYSQIIFTLKKRIYVDLV
EKRFVPTEQGILTTKNLELFFKQIIDVKYTAKMEENLDKISSGLVNKKELLQEFYDAFKQ
LYQIADQKLEKTKDIETDQKCNLCNAPLLIKKGRYGNFLGCSRFPECKNIVSLKEKTSSL
ETNPDMKTDQKCNLCNAPLLIKKGRYGNFLGCSRFPECKNIVKIQKN
NT seq 1944 nt   +upstreamnt  +downstreamnt
atgaaatcaaaagttattatagtagaatctcctactaaaaccaaaactttaagccgtttt
ttaaatgatgattttttaattttatcttccaaaggtcatattagagatttgtcgctaaaa
ggcaaagacagaatgggaattgacatcgaaaaaggctttattcctaaatacagcattatt
aaagaaaaagataacattgtagaaactcttatccaaaaaactaaaggcaaagaggttcta
ttagcaaccgatcctgaccgcgagggagaagcaattgcttggcatttatcacaaattctt
aatttagattcccaaaaaaccaatagaattgtttttcgagaaattaccaaagaagcagtc
ttaaaagctttgcaacaacctcgaaaaattaatgaactattagttttttcacaagaaact
cgtagaatgttagatcgcatcattggttttaaactgtcgcgtttggtaagaagacttaaa
tcgcaatcagcaggaagggtgcaatcagttgcccttaaattaattgttgatttagaagaa
aaaataaaagcttttgtccctgaagaatactatattattactgctttttttaaagatttt
caagcggaataccaaaatccttacaaaggaaaaatcaaagcccaagaagcttttacaatt
gtccaacaaatcaaagacaaatcttttttagttaaagaattaaaacaacaagaaaccaaa
aaattccctaaaccgccctttattacatctacacttcaacaagaagccattaaaagtcta
aatatgacttctaatcaagttatgagagttgctcaaaaactttatgaaggagttgatatt
ttaggcgaatctaaagggttaattacttatatgagaacagattcgcaaagacttgcagac
atttttgttaaagatgctcaaaaattaattaaaaagcaatatggtgaagaatatttaggt
acttacaaaaattctaaaacaccccagtcgcaagatgctcatgaagctataagacctact
gatttatctaaaacgcccgaaagtttagcccctcatcttgataaatacgaaaataaactt
tataaacttatttatcaaagaactttggcttctttaatgacgcctgctatatttcaaaaa
actcaagttttttttgaagttgcaaaccatctttttttaactgaaagtttgataaaaact
tttgatggctatcaaaaacttttgcaagatggtgacaaagataaaattattccttctttt
aaatcaaatgaaacttacttgcctcaagaaatccaaaatttacaaaaatttactaatcct
ccatcacgcttttctgaagccactttgattaaaactttagaaaaactaaatatcggaaga
ccttctacttattctcaaatcatttttactctcaaaaaaagaatctatgttgatttagta
gaaaaacgttttgttcctacagaacaaggaattttgaccactaaaaacctagaattgttt
tttaaacaaattattgatgtcaaatatactgccaaaatggaagaaaatttagataaaatc
tcttcaggattagtcaataaaaaagaattattgcaagaattttatgatgcttttaagcaa
ctttatcaaatagccgatcaaaaattagaaaaaacaaaagatatcgaaaccgatcaaaaa
tgtaatttatgcaacgcccctttgctcattaaaaaaggacgctatggtaattttttaggt
tgcagtcgttttcctgaatgcaaaaatattgtttctttaaaagaaaaaacaagctctttg
gaaacaaatcccgatatgaaaaccgatcaaaaatgtaatttatgcaacgcccctttgctc
attaaaaaaggacgctatggtaattttttaggttgcagtcgttttcctgaatgcaaaaat
attgttaaaattcaaaaaaattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system