KEGG   Azorhizobium caulinodans: AZC_0519
Entry
AZC_0519          CDS       T00609                                 
Symbol
ruvB
Name
(GenBank) holliday junction DNA helicase
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
azc  Azorhizobium caulinodans
Pathway
azc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:azc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AZC_0519 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:azc03400]
    AZC_0519 (ruvB)
Enzymes [BR:azc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AZC_0519 (ruvB)
DNA repair and recombination proteins [BR:azc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AZC_0519 (ruvB)
    RecFOR pathway proteins
     AZC_0519 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase AAA_28 AAA_3 AAA_2 AAA_16 nSTAND3 AAA_22 AAA_14 RNA_helicase AAA_18 AAA_17 Rad17 TsaE DUF815 AAA_33 IstB_IS21 ABC_tran NB-ARC NACHT Sigma54_activ_2 AAA_7 AAA_24 AAA_25 Parvo_NS1
Other DBs
NCBI-ProteinID: BAF86517
RhizoBase: AZC_0519
UniProt: A8IMA7
Position
574449..575501
AA seq 350 aa
MVAQGGMAPRLMTADSRPEDDADATLRPQRLADFVGQAQARANLEVFIQAARARGEALDH
VLFVGPPGLGKTTLAQIMAREMGVGFRSTSGPVIAKAGDLAAILTNLEERDVLFIDEIHR
LAPQVEEILYPAMEDYELDLVIGEGPAARSVKISLPKFTLVGATTRSGLLTTPLRDRFGI
PVRLVFYTLEELEYIVTRGARLLGIGIVPEGAREIARRARGTPRIAGRLLRRVRDFAQFA
GAEAIDRAIADRALMALDVDAMGLDTMDRRYLTVIAQHYGGGPVGVETLAAALSEPRDAI
EEIVEPYLVQQGFVQRTPRGRMLTSGAFRHLGLAEPQRPPSALPLFDEGD
NT seq 1053 nt   +upstreamnt  +downstreamnt
atggtggcacaaggcggcatggctccccgtctgatgaccgccgattcccgtcccgaggac
gatgccgacgcgaccttgcgtccgcagcggctcgccgatttcgtcgggcaggcgcaagcc
cgcgccaatctggaggtcttcatccaggccgcccgcgcgcggggcgaggcgctcgaccat
gtgctgttcgttggcccgcccggcctcggcaagacgacgctcgcccagatcatggcccgc
gagatgggggtgggcttccgctccacgtccggcccggtgatcgcgaaggccggcgacctc
gcggccatcctgaccaatctcgaagagcgcgacgtgctcttcatcgacgagatccaccgc
cttgcgccgcaggtggaggaaatcctctatccggccatggaggattacgagctcgatctc
gtcatcggcgaggggccggcggcccgctctgtgaagatctcgctgccgaagttcacgctg
gtgggcgccaccacccgttcgggcctgctcaccacgccgctgcgcgaccgcttcggcatt
cccgtgcggctggtcttctatacgctggaagagctggaatacatcgtcacccgcggcgcc
cgcctgctcggcatcggcatcgtgccggaaggcgcgcgggaaatcgcccgccgggcgcgc
ggcacgccccgcatcgcgggccgcctgctgcgccgggtgcgcgacttcgcccagttcgcc
ggggccgaggccatcgaccgggccatcgccgatcgggcgctgatggcgctcgacgtcgac
gccatgggcctcgacaccatggaccggcgctacctcacggtgatcgcgcagcattatggc
ggcgggccggtgggcgtggagacgctggccgccgcgctctccgagccgcgcgacgccatc
gaggagatcgtcgagccctatctggtgcagcagggtttcgtgcagcgcacgccgcgcggg
cggatgctcacctccggcgccttccggcatctgggccttgccgagccgcagcgcccgccg
agcgccttgcccctgtttgatgaaggtgattag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (30)   
   Pfam (30)   
All databases (45)   

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