KEGG   Azorhizobium caulinodans: AZC_1851
Entry
AZC_1851          CDS       T00609                                 
Symbol
recJ
Name
(GenBank) RecJ exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
azc  Azorhizobium caulinodans
Pathway
azc03410  Base excision repair
azc03430  Mismatch repair
azc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:azc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AZC_1851 (recJ)
   03430 Mismatch repair
    AZC_1851 (recJ)
   03440 Homologous recombination
    AZC_1851 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:azc03400]
    AZC_1851 (recJ)
DNA repair and recombination proteins [BR:azc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     AZC_1851 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     AZC_1851 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      AZC_1851 (recJ)
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB ATPgrasp_N
Other DBs
NCBI-ProteinID: BAF87849
RhizoBase: AZC_1851
UniProt: A8I2C5
Position
2117519..2119339
AA seq 606 aa
MGFMPFVNIALTNRPFLSVARSATGRTWRDRLDVRASQMALAIAQRHFVPDLVARILAGR
GVDIDDVPAFLDPTIKALLPDPDTLTDMGGAVERVAAAVTRGEQVAVFGDYDVDGATSTA
LLVDVLRAAGLDPFFHIPDRIFEGYGPNVNAIEQLAARGVTLLITVDCGTTSTEPLAAAR
RLGLDVVVIDHHQAGEHLPDANAIVNPNREDDLSGLGHLCAVGLVFVTVVGLVRKLREMG
HWTGDRPAPDLLAALDLVALGTVADVVPLKGLNRAFVTKGLIALRRRQRPGLTALMDVSR
LDGPPRPWHLGFLLGPRINAGGRIGDATLGTRLLLTQDPAEARAIAAELDRLNTERQAVE
QGILADAEAEAQAAMGIAGDGASTVVVSGQGWHPGVVGLVASRLKERFNRPAFAIAFTGE
TGTGSGRSIQGVDLGKAVRAAVEAGLLVKGGGHAMAAGLTVEKARLGDLRAFLENALAPD
VAKAAGEGTLTIDGALTASGATPALLDQVAKAGPFGAGNPEPVFAFPSHRLTYAETFGNG
HVRARLVAGDGTTLKAVAFRCAEEPLGRAILNARGRNLHVAGGLDMDHWQGEARVSLRVR
DVAEVG
NT seq 1821 nt   +upstreamnt  +downstreamnt
ttgggcttcatgcctttcgtgaacatcgccctgacgaatcgtcctttcctgtccgtcgcc
cgctcggccaccggccgcacttggcgcgaccggctggacgtgcgcgcctcgcagatggcg
ctcgccatcgcccagcggcatttcgtgccggatctcgtggcccgtatccttgccgggcgg
ggcgtcgacatcgacgacgtgcccgccttcctcgaccccaccatcaaggcgctgctgccg
gacccggacacgctcaccgacatgggcggggccgtggagcgggtggcggcggcggtgact
cgcggcgagcaggtggccgtgttcggcgactatgacgtggacggcgccacctcgaccgcc
ctcctcgtggacgtgctccgcgcggcggggcttgatcccttcttccacattcccgaccgc
atcttcgagggctacggccccaatgtgaacgccatcgagcaactggcggcgcggggtgtg
acgcttctcatcacggtggactgcggcaccaccagcacggagcctctggcggcagcccgg
cggctcgggctcgatgtggtggtgatcgaccaccatcaggcgggcgagcacctgccggac
gccaacgccatcgtgaaccccaaccgggaggatgatctttccggcctcgggcatctgtgt
gcggtgggcctcgtcttcgtgacagtggtgggactcgtgcgcaaattgcgcgagatgggc
cactggaccggcgaccggccagcaccggatttgctcgccgccctcgatctggtagcgctg
ggcacggtggcggacgtggtgccgctcaaggggctcaaccgcgccttcgtcaccaagggc
ctcatcgccctgcgccgccgccagcggccggggctcacggcgctcatggacgtctcccgt
ctcgacgggccgcctcgcccctggcacctcggctttctgctcggtccgcgcatcaatgcc
ggcgggcgcatcggcgatgcgaccctcggcacgcgcctgctgctgacacaggatcccgcc
gaggcgcgcgccatcgccgccgaactggaccgcctcaacaccgagcgtcaggcggtggag
cagggcatcctcgcggatgccgaggccgaggcgcaggccgccatgggaattgcgggcgac
ggcgcgtccaccgtggttgtgagcgggcaggggtggcaccccggcgtggtcggcctcgtc
gcctcgcgcctcaaggagcgcttcaaccgcccggccttcgccatcgctttcacgggcgag
accggcaccggctccggccgctccatccagggtgtcgatctcggcaaggcggtgcgcgcg
gccgtggaggcggggctgctggtgaagggcggcggccatgccatggcggccggcctcacg
gtggagaaggcccgcctcggcgacctgcgggctttcctcgaaaacgcgctcgcccccgac
gtcgccaaggcggcgggcgagggcacgctgaccatcgacggcgcgctcaccgccagcggc
gccacgccggcgctgctcgatcaggtggcgaaagccggccccttcggcgcgggcaatccc
gagccggtcttcgccttcccgtcccaccgcctcacctatgcggagaccttcggcaacggc
catgttcgcgcccgcctcgtggccggcgacggcaccacgctcaaggccgtggccttccgc
tgcgccgaggagccgctgggccgcgccatcctcaatgcgcggggccgcaacctgcacgtg
gccggcggcctcgacatggaccactggcagggcgaggcccgcgtcagcctgcgcgtgcgg
gacgtggccgaggtcggttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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