KEGG   Azorhizobium caulinodans: AZC_3127
Entry
AZC_3127          CDS       T00609                                 
Name
(GenBank) excinuclease ABC B subunit
  KO
K03702  excinuclease ABC subunit B
Organism
azc  Azorhizobium caulinodans
Pathway
azc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:azc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AZC_3127
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:azc03400]
    AZC_3127
DNA repair and recombination proteins [BR:azc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AZC_3127
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AZC_3127
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_22 UB2H AAA_16 SWI2_SNF2 DUF87 eIF3_p135 Kinesin Microtub_bd
Other DBs
NCBI-ProteinID: BAF89125
RhizoBase: AZC_3127
UniProt: A8IBW3
Position
complement(3584290..3586920)
AA seq 876 aa
MAKASRPGKLGERSQRHFEPAPAQPLDPALAQSLGLNPGDLSVDFESSGASATVQALSQL
IENGRPEVNGQTWVPHRPPRPEKSEGGIRFVMKSDFQPSGDQPQAIKELTEAARQGERDQ
VLLGVTGSGKTFTMAKVIETLQRPAIVLAPNKTLAAQLYGEFKSFFPDNAVEYFVSYYDY
YQPEAYVPRTDTYIEKESSINEQIDRMRHAATRSLLERDDVIIVASVSCIYGIGSVETYA
SMTFKLEVGERIDQRQLLADLVALQYKRIQSDFARGTFRVRGDVVEIFPAHYEDRAWRIS
LFGDEVESIVEFDPLTGHKTGDMKSVKVYASSHYVTPRPTLIQAITGIKAELKHRLDELY
KMGRLLEAQRLEQRTRYDIEMMEATGSCAGIENYSRWLTGRKPGEPPPTLFEYVPDDAMV
FIDESHVTVPQIGAMYRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDAMRPQTVHVSAT
PGPWEMDRTGGVFVEQVIRPTGLIDPPVDIRPARTQVDDLLGEVRATAAKGYRSLVTVLT
KRMAEDLTEYLHENGIRVRYMHSDIDTIERIEIIRDLRLGAFDVLIGINLLREGLDIPEC
GLVAILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADHETGSMKRAMAETARRREKQ
IAYNTEHGITPESVKKAIGDILNSVYERDHVAVDSGLAEEGAAFGHNLKAIMADLEKRMR
AAAADLDFEEAARLRDEIKRLQATELAVSDDPMARQEAVDDRTGGFRGPRKYGKAANLPA
AAAKGKGRARAPAKPADDAGIGEEQSRYAPDTGSRAGPPEMPLYAARPAARAAKPSLDDM
GPGTDRAEPLGAADFRPGPRPDPGTKGYRKGGRRKG
NT seq 2631 nt   +upstreamnt  +downstreamnt
atggccaaagcatcccgtcccggcaagctcggtgagcgctcgcagcgtcatttcgagccc
gcgcccgcccagccgctcgatcccgcgctcgcgcagtctctggggctcaaccccggcgac
ctctccgtcgatttcgaatcgagcggcgcctccgccacggtgcaggcgctctcgcaactg
atcgagaacgggcggccggaggtgaacggccaaacctgggtgccccatcgcccgccgcgc
ccggagaagagcgaaggcggcatccgcttcgtgatgaagagcgacttccagccttcgggc
gaccagccgcaggccatcaaggaactgacggaggctgcccggcagggcgagcgcgatcag
gtgctgctgggcgtcaccggctcgggcaagaccttcaccatggccaaggtgatcgagacg
cttcagcgcccggccatcgtgctggcgcccaacaagacgctggcggcgcagctctatggc
gagttcaagagcttcttcccggacaatgccgtcgagtacttcgtctcctactacgattat
taccagccggaagcctacgttccgcgcacggacacctatatcgagaaggaatcctccatc
aacgagcagatcgaccgcatgcgccatgcggcgacccgctcgctgctggagcgtgacgac
gtcatcatcgttgcctcggtgtcctgcatctacggtatcggctcggtggagacctacgcc
tccatgaccttcaagctggaggtgggcgagcgcatcgaccagcgccagcttctggccgat
ctcgtggccctccagtacaagcgcatccagtcggatttcgcacgcggcaccttccgggtg
cgcggcgacgtggtggaaatcttccccgcccactatgaggatcgcgcctggcgcatctcc
ctcttcggtgacgaggtggagagcatcgtcgagttcgacccgctcaccggccacaagacc
ggcgacatgaagagcgtgaaggtctacgcctcctcgcactatgtgacgccgcgcccgaca
ctcatccaggctatcaccggcatcaaggccgagctgaagcaccggctggacgaactctac
aagatgggccgcctgctggaagcgcagcggctggagcagcgcacccgctacgacatcgag
atgatggaggcgacgggcagctgcgccggcatcgagaactattcgcgctggctgactggc
cgcaagccgggcgagccgccgccgaccctgttcgaatacgtgcccgacgacgccatggtc
ttcatcgacgagagccatgtgaccgtgccgcagatcggcgccatgtatcgcggcgacttc
cgccgcaaggcgacgctggcggaatacggcttccgcctgccgtcctgcatggacaaccgc
ccgctgcgtttcgaggaatgggatgccatgcggccgcagacggtgcatgtctcggccacc
cccggtccttgggagatggaccgcaccggcggtgtctttgttgagcaggtgatccgtccc
accggcctcatcgacccgccggtggacatccgccccgcgcgcacgcaggtggacgacctc
ttgggcgaggtgcgggcgaccgctgcgaagggctatcgcagcctcgtgaccgtgctcacc
aagcgcatggcggaagacctcacggaatatctgcatgagaacggcatccgcgtgcgctac
atgcactcggacatcgacaccatcgagcgcatcgagatcatccgcgacctgcgcctcggc
gccttcgacgtgctgatcggcatcaacctgctgcgcgagggcctcgacattcccgagtgc
gggctggtggccattctggatgcggacaaggaaggcttcctgcgctcggagacctcgctc
atccagaccatcggccgggcggcgcgaaacgtggacggccgggtgatcctctatgcggat
cacgagacgggctccatgaagcgggccatggccgagaccgcccgccgccgcgagaagcag
atcgcctacaacaccgagcacggcatcacgcccgagagcgtgaagaaggccatcggcgac
atcctgaactcggtctatgagcgcgaccacgtggccgtggactccgggctcgcggaggag
ggggcggccttcggacacaatctcaaggcgatcatggcggaccttgagaagcgcatgcgt
gccgctgccgccgacctcgatttcgaggaggccgcgcgcctgcgggacgagatcaagcgc
ctccaggccaccgagcttgccgtctcggatgatcccatggcgcggcaggaggcggtggac
gaccggaccggcggcttccgtggtccgcgcaaatacggcaaggccgcgaaccttccggct
gcggccgccaagggcaaggggcgggcccgggccccggccaagccagccgacgatgcgggc
atcggcgaggaacagtcccgatacgcgcccgacaccggaagccgtgccggcccccccgaa
atgccgctctatgcggcgcgccctgcggcgcgtgcggccaagccttcgctggacgacatg
ggaccggggacggatcgggccgagcccctcggtgccgccgatttccgtccggggccccgc
ccggatcccggcacgaaggggtaccgcaagggtgggcgtcgcaagggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (34)   

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