KEGG T04019: AzCIB

Azoarcus sp. CIB: AzCIB_2623

Entry

AzCIB_2623        CDS       T04019

Name

(GenBank) transcription elongation factor

K02600

transcription termination/antitermination protein NusA

Organism

azi Azoarcus sp. CIB

Brite

KEGG Orthology (KO) [BR:azi00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:azi03021]
    AzCIB_2623
   03009 Ribosome biogenesis [BR:azi03009]
    AzCIB_2623
Transcription machinery [BR:azi03021]
Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     AzCIB_2623
Ribosome biogenesis [BR:azi03009]
Prokaryotic type
  rRNA transcription factors
   AzCIB_2623

SSDB

Motif

Pfam:

NusA_N KH_5 HHH_5 S1 KH_2 DUF5830 KhpA-B_KH

Other DBs

NCBI-ProteinID:

AKU12516

Position

complement(2932735..2934210)

AA seq 491 aa
MSREILLLVDALAREKNVAKDIVFGALETALASATKKRINDEADVRVTIDRETGDYESFR
RWVVLPDEEVVNDEAEMGIIDAREVESGIQVGEYIEEPLEAIDFGRIGAQAAKQVILQRI
RDAEREQVLNDFLDRKEHLVSGTIKRMERGNAIIEVGRLEAMIPRDQMIPRENLRVGDRV
KAFLLRIDRGARGPQLILSRTAAEFLGKLFELEVPEIEDGLLAIKACARDPGLRAKIAVQ
SNDARIDPIGTCVGLRGSRVTAVRNEIAGEQIDIIVWSQDPAQFVISALQPAEVVSIVVD
EDSHSMDVVVDDNNLAIAIGRNGQNVKLASELTGWTINLMSEEESAQKSGQERQSLRQLF
MDKLDVDEELADILIDEGFSSLEEIAYVPLAEMLEIEAFDEETVNELRNRARNVLLTEAI
VTEEQLENVSDDLINLDGMDKPLAAKLAEHGVRTRDDLADLAVDELVEIAGIEQERASTL
ISIARAHWFEE

NT seq 1476 nt +upstreamnt +downstreamnt
atgagccgcgagattttgctgcttgtcgatgcgctggcgcgcgaaaagaatgtagccaag
gacatcgtgttcggtgccctggaaacggcgctcgcctccgcgacgaaaaaacgcatcaat
gacgaagccgatgtgcgcgtgacgatcgaccgcgagaccggtgattacgaatcctttcgc
cgctgggtcgtgctgccggacgaagaggtcgtcaacgacgaggccgagatgggcatcatc
gatgcccgcgaagtcgagtccggcatccaggtcggcgaatacatcgaggagccgctcgag
gcgatcgatttcggtcgtatcggtgcccaggcggccaagcaggtgatcctgcagcgcatt
cgcgacgccgagcgcgagcaggtgctcaacgacttcctcgatcgcaaggaacatctcgtt
tcaggcactatcaagcgcatggagcgcggcaacgcgatcatcgaagtgggtcgcctcgaa
gccatgattccgcgtgatcagatgatcccgcgcgagaacctgcgcgtcggcgaccgcgtc
aaggctttcctgctgcgcatcgaccgtggagctcgtggcccccagttgatcctgtcgcgc
acggctgcggaatttctcggcaagctgttcgaactcgaagtgccggaaatcgaggatggc
ctccttgcaatcaaggcttgtgcccgtgaccccggcctgcgtgcgaaaatcgccgtgcag
tcgaacgacgcgcgcatcgatccgatcggcacctgcgtcggtctgcgcggctcgcgcgtc
accgcggtgcgcaacgagattgcaggcgagcagatcgacatcatcgtgtggtcgcaggat
cccgcccagttcgtgatctccgcgctgcagccggcggaggtcgtgtccatcgtcgtggat
gaggacagccacagcatggacgtcgtcgtcgacgacaataatctcgcgatcgcgatcggt
cgcaacggccagaacgtcaagctcgcgtccgagctcacgggctggacgatcaacctgatg
agcgaagaggagtctgcgcagaagtccgggcaggagcgccagagcctgcgccagctcttc
atggacaagctcgatgtcgacgaggaactcgccgacatcctgatcgacgaaggtttttcg
tcgcttgaggaaattgcgtacgtgccgctcgccgaaatgctcgaaatcgaagccttcgat
gaagagacggtcaatgagctgcgcaaccgtgcgcgcaacgtcctgcttaccgaggccatc
gtgaccgaggagcagctggaaaatgtttccgacgatctgatcaatctcgacgggatggac
aagccgctcgctgccaagctggccgagcatggcgtacgcacccgcgacgatctggccgat
ctcgcagtcgatgagctggtcgaaatcgccggaatcgaacaagaacgtgccagcacgctg
atttcgatcgcgcgcgcgcattggttcgaagaatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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