KEGG   Azoarcus olearius BH72: azo1505
Entry
azo1505           CDS       T00441                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
azo  Azoarcus olearius BH72
Pathway
azo03410  Base excision repair
azo03430  Mismatch repair
azo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:azo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    azo1505 (recJ)
   03430 Mismatch repair
    azo1505 (recJ)
   03440 Homologous recombination
    azo1505 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:azo03400]
    azo1505 (recJ)
DNA repair and recombination proteins [BR:azo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     azo1505 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     azo1505 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      azo1505 (recJ)
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB Glyco_transf_4
Other DBs
NCBI-ProteinID: CAL94122
RhizoBase: azo1505
UniProt: A1K5L7
Position
complement(1646272..1647963)
AA seq 563 aa
MIQIHPRAVPQRAAAALMDAGIHPLLARLYAARGIARSSDLDTSLKALLPPQALTGTAEA
AQLLADAIEAGARMVIVADYDCDGATACAVGVRALRAFGADVHYLVPDRVTLGYGLTPAM
VEIAARLEPDVLITVDNGIASVEGIAAARAHGMATIITDHHLPGDVLPDADVIVNPNQPG
CDFPSKALAGVGAMFYTMLALRAELRERGAFAGGQEPNLADLLDLVALGTVADVVKLDHN
NRILVAQGLQRMRAGRMQPGIRALFAAAGREPARANTFDLGFAVGPRLNAAGRLSDMSLG
IECLITDDPGRALNIAQELDKLNRERRSIEAGMQEEAALRLEGFDPGASASIALFEPDWH
QGVIGIVAGRIKEKLHRPTIAFARGNDGELKGSGRSIAGLHLRDALDLVTKQHPDLIVRF
GGHAMAAGLTIREADFDRFSSVFEEVVAGLVEPAALQRRIETDGALEAGYLSLESARLLE
KEIWGQGFPAPVFDDVFRVERQRILKDRHLKLELGKQGARYDAIQFNFADGAPDTIRAAY
RLSINEYNGVSNVQLMLEHFEAA
NT seq 1692 nt   +upstreamnt  +downstreamnt
atgatccagatccacccccgtgccgtcccgcagcgcgccgccgccgccctgatggacgcc
ggcatccacccgctgctggcccgcctctatgccgcgcgtggcatcgcccgcagcagcgac
ctcgacacctcgctgaaggcgctgttgccgccgcaggcgctcaccggcaccgccgaggcg
gcgcaactgctggccgacgcgatcgaagccggcgcgcgcatggtgatcgtcgctgattac
gactgcgacggcgccaccgcctgcgccgtcggtgtgcgcgcgctgcgcgccttcggcgcc
gacgtgcattacctggtgccggaccgcgtcaccctgggctacggcctcaccccggcgatg
gtggagatcgccgcgcggctggagccggacgtgctgatcacggtggacaacggcatcgcc
agcgtcgaaggcatcgccgccgcgcgcgcccacggcatggcgacgatcatcaccgaccac
cacctgccgggcgacgtgctgcccgacgccgacgtgatcgtgaaccccaaccagcccggc
tgcgacttcccgagcaaggcgctggccggcgtcggcgcgatgttctacaccatgctcgcg
ctgcgcgcggagctgcgcgaacgcggtgccttcgccggcggccaggaacccaacctcgcc
gacctgctcgacctggtggcgctcggcaccgtggccgacgtggtgaagctcgaccacaac
aaccgcatcctggtcgcccagggcctgcagcgcatgcgcgccggccgcatgcagccgggc
atccgcgcgctgttcgccgccgccggccgtgagccggcgcgcgccaacaccttcgacctc
ggctttgccgtcggcccgcgcctgaatgccgccggccgcctgtcggacatgagcctgggc
atcgaatgcctgatcaccgacgatcccggccgcgcgctcaacatcgcgcaggaactcgac
aagctcaaccgtgagcgccgcagcatcgaggccggcatgcaggaagaagccgcgctgcgg
ctggaaggtttcgatcccggcgccagcgccagcatcgcgctgttcgagcccgactggcac
cagggcgtgatcggcatcgtcgccggccgcatcaaggaaaagctgcaccgcccgaccatc
gccttcgcgcgcggcaatgacggcgaactcaagggctccggccgttcgatcgccggcctg
cacctgcgcgacgcgctcgacctcgtcaccaagcagcatcccgacctcatcgtgcgcttc
ggcggccacgcgatggcggccggcctcaccatccgcgaggcggatttcgaccgtttcagc
agcgtgttcgaggaagtggtggccgggctggtcgaaccggccgcgctgcaacggcgcatc
gaaaccgacggcgcgctggaggccggctatctcagcctggaatccgcccgcctgctggaa
aaggagatctggggccagggctttccggccccggtgttcgacgacgtcttccgcgtcgaa
cgccagcgcatcctcaaggaccgccacctcaagctcgaactcggcaagcagggggcgcgc
tacgacgccatccagttcaacttcgccgacggcgcgccggacaccatccgcgccgcctac
cggctgtccatcaacgaatacaacggcgtcagcaacgtgcagctaatgctggagcacttc
gaagcggcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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