KEGG T03686: DO78

Brucella abortus NCTC 10505: DO78_53

Entry

DO78_53           CDS       T03686

Symbol

gyrB

Name

(GenBank) DNA gyrase, B subunit

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

babc Brucella abortus NCTC 10505

Brite

KEGG Orthology (KO) [BR:babc00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:babc03032]
    DO78_53 (gyrB)
   03400 DNA repair and recombination proteins [BR:babc03400]
    DO78_53 (gyrB)
Enzymes [BR:babc01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     DO78_53 (gyrB)
DNA replication proteins [BR:babc03032]
Prokaryotic type
  DNA Topoisomerases
   DO78_53 (gyrB)
DNA repair and recombination proteins [BR:babc03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      DO78_53 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook GyrB_insert HATPase_c_3 Phage_cap_P2 ABATE

Other DBs

NCBI-ProteinID:

AIJ58120

Position

1:complement(60512..62935)

AA seq 807 aa
MNSEAPAEYGADSIRVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDEALAGHA
TLVTVTLNADGSCTVTDNGRGIPTDIHKEEGVSAAEVIMTQLHAGGKFDQNSYKVSGGLH
GVGVSVVNALSIWLKLKIRRAGKIHEMSFTHGVADAPLVVTGDAGSETGTEVSFLPSPDT
FSMVEFDYETLERRLRELAFLNSGVRIKLADRRHADVKEQELHYDGGLVEFVKYIDQSKK
SLLEEPIYIRSEKDGMTVEVAMWWNDSYHEKVLCFTNNIPQRDGGTHLAGFRGALTRQIT
GYADSSGMTKKEKVQLTGDDCREGLTAVLSVKVPDPKFSSQTKDKLVSSEVRPVVEGLVN
EALSTWLEEHPAGGKIVVEKVIQAAAAREAARKARDITRKSNLSVTSLPGKLADCQERDP
AKSEIFIVEGDSAGGSAKSGRSRQNQAILPLRGKILNVERVRFDRMISSDQVGTLITALG
TSIGKDETHGFNAEKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPELIERGHIYIAQP
PLYKVTRGKSSQYIKNEAAFEDFLIETGLEETTLELVTGEMRAGPDLRSVVEDARTLRQL
LHGLHTRYDRSVVEQAAIAGLLNPDASRDNATAQHSADTVAKRLDMISEETERGWSGHVM
EDGGYRFERMVRGVKDIAILDMALLGSADARQVDRVAGRMAEIFMEPPVLRRKDKVESLS
GPVALLDAVFATGRKGLTLQRYKGLGEMNAEQLWETTLDPNVRSLLQVKVNDATDADSLF
SRLMGDEVEPRREFIQDNALNVANLDV

NT seq 2424 nt +upstreamnt +downstreamnt
atgaattccgaagcccccgccgaatatggcgcggattccattcgtgttctgaaaggtctg
gatgctgttcgcaagcgccccggcatgtatatcggcgacacggacgacggctccggcctg
catcacatggtctatgaagtcgtggacaacgccatcgacgaagcactggccggacatgcc
acgctcgtcaccgtaacgctcaatgccgacggctcctgcaccgtgaccgacaacgggcgc
ggcatcccgaccgacatccacaaggaagaaggcgtttcagctgccgaggtcatcatgacc
cagcttcatgcgggcggcaaattcgaccagaattcctacaaggtttccggcggcctgcat
ggcgtcggcgtttcagtggtgaatgcgctgtcgatctggctgaagctgaaaatccggcgc
gcgggcaaaatccatgaaatgagcttcacacacggcgttgccgatgcgcccttggtcgta
accggcgatgcaggcagtgaaaccggcacggaagtgagcttcctgccctcgcctgacacc
ttcagcatggtcgaattcgactatgaaacgctggaacgccgcctgcgcgaacttgccttc
ctcaattcgggcgtgcgcatcaagctcgccgaccgccgccatgcggatgtgaaggaacag
gaactgcattatgacggcggcctggtcgaattcgtcaaatatatcgaccagagcaagaag
tcgcttctggaagagcctatctatattcgcagcgaaaaggatggcatgacggtggaagtc
gccatgtggtggaacgattcctaccacgagaaggtgctgtgcttcaccaacaacatcccg
cagcgcgacggcggcacgcatctggccggtttccgcggcgcgctgacccgacagatcacg
ggctatgcggactcttccggcatgacgaagaaggaaaaggtacagcttaccggcgacgat
tgccgcgagggcctgaccgccgttctttccgtgaaggtgccggatccgaaattctcctcg
cagaccaaggacaagcttgtttcctccgaagtgcgcccggtggtggaaggcctcgtcaat
gaagcgctttccacatggcttgaagaacatccggcaggcggcaagatcgttgtcgagaag
gtcattcaggcggcggcggcccgcgaagccgcccgcaaggcgcgcgacatcacccgcaag
agcaatctcagcgtgacgtccctgcccggaaagcttgccgattgccaggagcgcgatccg
gccaagtccgaaatcttcatcgtcgagggcgattcggcaggcggttccgccaagagcggg
cgctcgcgccagaatcaggccattctgccgctgcgcggcaaaatcctgaacgtggaacgc
gtgcgtttcgaccggatgatttcatccgatcaggtgggcaccctcatcacggcgcttggc
acctccatcggcaaggatgaaacgcacggcttcaacgccgaaaagctgcgttatcacaag
atcatcatcatgaccgacgccgacgtcgatggcgcccatattcgtacgcttctgctcacc
ttcttcttccggcagatgccggaactgatcgaacgcgggcatatctatatcgcgcagccg
ccgctctataaggtgacacgcggcaagtcttcgcaatatatcaagaacgaagccgccttt
gaggatttcctcatcgaaaccggccttgaagaaacgacactggaactggtgactggcgaa
atgcgcgccgggccggatttgcgctcggtggtggaggatgcgcgcacgctgcgtcagctt
ctgcacggcctgcacacccgctatgaccgcagcgtggtggaacaggcggcaattgccggc
ctgctcaaccccgatgcctcaagggacaatgcaacggcacagcattccgccgatacggtt
gccaagcgtctcgacatgatttcggaagagaccgagcgcggctggagcggccatgtgatg
gaagacggcggctatcgcttcgagcgtatggtgcgcggtgtaaaggatatcgccattctc
gacatggccctgctcggctcggccgatgcccgccaggtcgaccgcgttgcgggccgcatg
gctgaaatcttcatggagccgccggtgctgcgccgcaaggacaaggtggaatcgctttcc
ggcccggtggccctgcttgacgccgtgtttgcaaccggccgcaagggtctgaccctccag
cgttacaaaggcttgggcgaaatgaacgccgaacagctttgggaaacgacacttgatccg
aatgtgcgttcgctcctgcaggtgaaggtgaacgatgcaaccgatgccgattccctcttc
tcgcgccttatgggcgacgaggtggagccgcggcgtgaattcattcaggataatgcgcta
aacgtcgccaatctggacgtttga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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