KEGG T00684: BamMC406

Burkholderia ambifaria MC40-6: BamMC406_0028

Entry

BamMC406_0028 CDS T00684

Definition

type III restriction protein res subunit

Orthology

K01156

type III restriction enzyme [EC:3.1.21.5]

Organism

bac Burkholderia ambifaria MC40-6

Class

SSDB

Motif

Pfam:

ResIII DEAD PhoH

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1:complement(35356..38370)

AA seq 1004 aa
MRLHFEADLDYQREAIDAVCDLFRGQESYRGDFSVLANAAPGTTAAAQGSLGFAVSEQGV
GNRLSLTDDALARNLADVQLRGGLPASGLPGSRDFTVEMETGTGKTYVYLRTIFELNRRY
GFTKFVIVVPSIAIKEGVHKTLSITEDHFRALYAGVPYDYFLYDSAKLGQVRHFAASAAI
QIMVMTVAAINKKEINNLYKDSEKTGGEKPIDLIRATRPIVIVDEPQSVDGGLEGRGREA
LAAMAPLCTLRYSATHVDRHHMVYRLDAVDAYERKLVKQIEIASAIVEDAHNKPYVRLVG
VSNRRGAISARIELDVATAAGVKRQIVSATDGDDLERLTKRALYAGLRVGEVHAVKGAEY
VELRHPEGEAFLSLGEAFGDIDTLAVQREMIRRTIREHLDKELRLAERGVKVLSLFFVDS
VERYRRYDENGMPVKGDYALIFEEEYARAARVPAYRALFDGVDVALEVERAHNGYFSIDR
KGGWTDTSESSAAARENAERAYGLIMREKEALLSFDTPLKFIFSHSALKEGWDNPNVFQI
CTLRDIQTERERRQTLGRGLRLAVDQDGERVRDPGVNTLTVIATERYESFAENLQKEIEA
DTGIRFGIVEEHQFAALPVQEGDGPAHALGIELSRVLWAHLREQGYVDAQGKVLDRLKDA
LRQSALVLPEAFETLRAPIVAMLRKLSGRFAVRNADERRAIALRRDASGKAVVFGDDFRA
LWDRIRHRTVYSVEFDNAKLVRDCTAALRDAPDIARARLQWRKAEIDIGKAGIEAVEVAG
AGTVLIDEGELPLPDLLTELQDRTQLTRRSLATILADSGRLDDFRVNPQQFIALAADAIN
RCKRLALVAGIAYRRLGERNVHALESFESEALTGYLRNLRPDARKSIHEAVVCETDAERA
FADALEAHDGVKLYAKLPAWFRVPTPLGSYHPDWAVLAEQDGGERLYFVVDTPNADGDVT
TEHERAKLACGEAHFRALVDGEDAARFVRVRQAEALFEPAVLRL

NT seq 3015 nt +upstreamnt +downstreamnt
atgcggctgcatttcgaagcggatctcgactaccagcgcgaggcgatcgacgccgtctgc
gacctgtttcgcggccaggaatcgtatcgcggcgacttcagcgtgctcgcgaacgccgcg
cccggcacgacggccgccgcgcaaggttcgctcggcttcgcggtgtcggagcaaggcgtc
ggcaaccggctgtcgctgaccgacgacgcgctcgcgcgcaatctcgccgacgtgcagctg
cgcggcgggctgccggcgtccggcctgcccggctcgcgcgacttcaccgtcgagatggag
accggcaccggcaagacctacgtgtacctgcgcacgatcttcgagctgaaccgccgctac
ggcttcacgaagttcgtgatcgtcgtgccgtcgatcgcgatcaaggaaggcgtgcacaag
acgctgtcgatcaccgaggaccatttccgcgcgctgtatgcgggcgtgccgtacgactac
ttcctgtacgactccgcgaagctcggccaggtgcgccacttcgcggcgagcgcggcgatc
cagatcatggtgatgacggttgccgcgatcaacaagaaggagatcaacaacctctacaag
gacagcgagaagacgggcggcgagaagccgatcgacctgatccgcgcgacgcggccgatc
gtgatcgtcgacgagccgcagagcgtcgacggcgggctcgaggggcgcgggcgcgaagcg
ctcgccgcgatggcgccgctctgcacgctgcgctattcggcgacgcacgtcgaccgtcat
cacatggtgtaccggctcgacgcggtcgatgcgtacgagcgcaagctcgtcaagcagatc
gagatcgcgtcggcgatagtcgaggatgcgcacaacaagccgtacgtgcggctcgtcggc
gtgtcgaaccggcgcggcgcgatcagcgcgcgcatcgagctggacgtcgcgaccgcggcc
ggcgtgaagcgccagatcgtgtcggcgaccgacggcgacgatctcgagcgcctgacgaag
cgcgcactgtatgcggggctgcgcgtcggcgaagtccatgcggtgaagggcgccgagtac
gtcgagctgcgccatccggaaggcgaggcgttcctgtcgctcggcgaggcgttcggcgac
atcgacacgctcgccgtgcagcgcgagatgatccgccgcacgatccgcgagcatctcgac
aaggaattgcgtctggccgagcgcggcgtgaaggtgctgtcgctgttcttcgtcgattcg
gtcgaacgctatcgccgctacgacgagaacgggatgcccgtgaagggcgactacgcgctg
atcttcgaagaggaatatgcgcgcgcggcccgcgtgccggcttaccgtgcgttgttcgac
ggcgtcgacgtcgcgctcgaggtcgagcgcgcgcacaacggctacttctcgatcgaccgc
aagggtggctggaccgacacgagcgagagcagcgccgccgcacgcgagaacgcggagcgc
gcgtacggcctcatcatgcgcgagaaggaagcgctgctgtcgttcgacacgccgctgaag
ttcatcttctcgcactcggcgctgaaggaaggctgggacaacccgaacgtgttccagatc
tgcacgctgcgcgacatccagaccgagcgcgagcgtcgccagacgctcggccgcgggctg
cgcctcgccgtcgaccaggacggcgagcgcgtgcgcgacccgggcgtcaacacgctgacc
gtgatcgcgaccgagcgctacgagtcgtttgccgagaacctgcaaaaggaaatcgaggcc
gatacgggcatccgcttcgggatcgtcgaggaacaccagttcgcggcgctgccggtgcag
gaaggcgacgggcccgcgcatgcgctcggcatcgagctgtcgcgcgtgctgtgggcgcat
ctgcgcgaacagggctacgtcgacgcgcagggcaaagtgctcgaccggctgaaggacgcg
ctgcgccagagcgcactcgtgctgcccgaagcgttcgagacgctgcgcgcgccgatcgtc
gcgatgctgcgcaagctgtcgggccgcttcgccgtgcgcaatgcggacgagcggcgcgcg
atcgcgttgcggcgcgacgcgtcgggcaaggctgtcgtgttcggcgacgacttccgcgcg
ctgtgggaccgtatccgccaccgcaccgtgtacagcgtcgagttcgacaacgcgaagctc
gtgcgcgactgcacggccgcgctgcgcgacgcgccggacatcgcgcgtgcccggctgcag
tggcgcaaggccgagatcgacatcggcaaggccggcatcgaggcggtcgaggtggccggc
gcgggcacggtgctgatcgacgaaggcgagctgccgctgcccgacctgctcaccgagctg
caggaccgcacgcagctcacgcgccgctcgctcgcgacgatcctcgccgacagcggccgg
ctcgacgatttccgcgtgaatccgcagcagttcatcgcgctggccgccgatgcgatcaac
cgctgcaagcggctcgcgctggtcgcgggcatcgcgtaccgcaggctcggcgaacgcaac
gtgcatgcgctcgaatcgttcgagagcgaggcgctgaccggctatctgcgcaacctgcgt
cccgatgcgcgcaagtcgatccacgaggccgtcgtgtgcgagaccgacgcggagcgtgcg
ttcgccgatgcgctggaagcgcacgacggcgtgaagctgtacgcgaagctgcccgcgtgg
ttccgcgtgccgacgccgctcggcagctatcaccccgactgggcggtgctcgcggagcag
gatggcggcgagcggctgtatttcgtcgtcgatacgccgaatgccgatggcgacgtgacg
accgagcacgagcgcgcgaagctcgcgtgcggtgaagcgcatttccgtgcgctggtggac
ggggaagatgccgcgcgattcgtgcgcgtcaggcaggcggaggcgttgttcgagcctgct
gtgttgcggctttga

All links

Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-BAC (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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