KEGG B.ambifaria_MC40-6: BamMC406

Burkholderia ambifaria MC40-6: BamMC406_0460

Entry

BamMC406_0460 CDS B.ambifaria_MC40-6

Gene name trpC

Definition indole-3-glycerol-phosphate synthase (EC:4.1.1.48)

Orthology K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48]

Pathway bac00400 Phenylalanine, tyrosine and tryptophan biosynthesis
bac01100 Metabolic pathways
bac02020 Two-component system

Class Metabolism; Amino Acid Metabolism; Phenylalanine, tyrosine and
tryptophan biosynthesis [PATH:bac00400]
Environmental Information Processing; Signal Transduction;
Two-component system [PATH:bac02020]

SSDB

Motif Pfam: IGPS QRPTase_C
PROSITE: IGPS

Other DBs NCBI-GI: 172059521
NCBI-GeneID: 6177646
JGI: BamMC4060460
UniProt: B1YSF5

Position 1:complement(516714..517499)

AA seq 261 aa
MSDILDRIIAVKREEVAAAMRSAPLEALKLEASARDLRDFVGALRAKQAAGHAAVIAEVK
KASPSKGVLREHFVPADIARSYAAHGAACLSVLTDEQFFQGSVRYLEEARAACTLPVLRK
DFIVDAYQILEARAMGADAILLIAAALDTPLMQDLEAYAHSLGLAVLVEVHDRDEMEQAL
TLKTPLLGINNRNLRTFETSIQTTLDMLDMIPPERMVVTESGILSRTDVDTMRAANVNAF
LVGEAFMRADQPGEELARMFF

NT seq 786 nt +upstreamnt +downstreamnt
atgagcgacattctcgaccgaatcattgccgtcaagcgcgaagaagtcgcggcggccatg
cgcagcgcgccgctcgaggcactgaaactggaagcatcggcgcgcgacctgcgcgacttc
gtcggcgcactgcgcgcgaagcaggcggccggccacgcggcggtgattgccgaagtgaag
aaggcgagcccgtcgaagggcgtgctgcgcgagcatttcgtgcccgccgacatcgcacgc
tcgtatgcagcccacggcgccgcgtgcctgtcggtgctgaccgacgagcagttcttccag
ggcagcgtccgctacctcgaggaagcccgtgcggcctgcacgctgccggtgctgcgcaag
gacttcatcgtcgatgcgtaccagatcctcgaagcgcgcgcgatgggcgccgacgcgatc
ctgctgatcgcggccgcgctcgacacgccgctgatgcaggacctcgaggcatatgcgcac
tcgctcggcctcgcggtgctggtcgaagtccacgaccgcgacgagatggaacaggcgctg
acgctgaagacaccgctgctcggcatcaacaatcgcaacctgcgcacgttcgagacgtcg
atccagaccacgctcgacatgctcgacatgattccgccggaacggatggtcgtgaccgaa
tcgggcatcctgtcgcgcaccgacgtcgacacgatgcgcgcggcgaacgtgaacgcgttc
ctcgtcggcgaagcgttcatgcgcgccgaccagccgggcgaggaactcgcgcggatgttc
ttctga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-BAC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (2)   
   PROSITE (1)   
All databases (17)

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