KEGG B.ambifaria_MC40-6: BamMC406

Burkholderia ambifaria MC40-6: BamMC406_0642

Entry

BamMC406_0642 CDS B.ambifaria_MC40-6

Definition catalase/peroxidase HPI

Orthology K03782 catalase/peroxidase [EC:1.11.1.6]

Pathway bac00380 Tryptophan metabolism
bac00680 Methane metabolism
bac01100 Metabolic pathways

Class Metabolism; Energy Metabolism; Methane metabolism [PATH:bac00680]
Metabolism; Amino Acid Metabolism; Tryptophan metabolism
[PATH:bac00380]

SSDB

Motif Pfam: peroxidase
PROSITE: PEROXIDASE_1 PEROXIDASE_2 PEROXIDASE_4

Other DBs NCBI-GI: 172059703
NCBI-GeneID: 6178921
JGI: BamMC4060642
UniProt: B1YTH4

Position 1:723017..725203

AA seq 728 aa
MSTESKCPFNHTAAGGTSNKDWWPNQLNLNILHRHSALSDPMDKDFDYAQAFKKLDLAAV
KRDLQALMTTSQDWWPADFGHYGGLFVRMAWHSAGTYRTADGRGGAGGGQQRFAPLNSWP
DNANLDKARRLLWPIKQKYGRNISWADLLILTGNVALESMGFKTFGYAGGRADTWEPDDV
YWGSEKIWLELSGGPNSRYSGDRELENPLAAVQMGLIYVNPEGPDGNPDPVAAARDIRDT
FARMAMNDEETVALIAGGHTFGKTHGAGPATDVGPEPEAAGIEQQGLGWKSAYASGKGHD
AITSGLEVTWTSTPTKWSHDFFKHLFSYEWELTKSPAGAHQWVAKGADEVIPDAFDASKK
HRPTMLTTDLSLRFDPAYEKISRRFYENPAEFADAFARAWFKLTHRDMGPRARYLGPEVP
AEELLWQDPIPVVDHPLIDDADVAALKAKVLASGLSVAQLVSTAWASASTFRGSDKRGGA
NGARIRLAPQKDWEVNQPAALAAVLETLEGVRKAFNDAQTGGKKVSLADLIVLAGAAGIE
QAAKNAGVAVTVPFAPGRMDASQEQTDVDAMAVLEPVADGFRNYLKSAYKTPAEALLVDK
AQLLTLNGPELTVLVGGLRVLGANVGDAKHGVFTDRPGTLSNDFFVNLLDMGTEWKPVSA
ANDVFEGRDRATGLVKWTGTRVDLIFGSHSQLRALAEVYGSADANEKFVRDFVAAWDKVM
NLDRFDLA

NT seq 2187 nt +upstreamnt +downstreamnt
atgtcgaccgaatcgaaatgtccgttcaaccatacggcggccggcggcacgtcgaacaag
gactggtggccgaaccagctgaacctgaacatcctgcaccggcactcggcgctgtccgat
ccgatggacaaggatttcgactacgcacaagcattcaagaagctggacctcgcggcggtg
aagcgcgacctgcaggcgctgatgacgacgtcgcaggactggtggccggccgacttcggc
cactacggcggcctgttcgtccggatggcctggcacagcgccggcacgtaccggaccgcc
gacggccgcggcggcgcgggcggcgggcagcagcgcttcgcgccgctgaacagctggccg
gacaacgcgaacctcgacaaggcgcgccggctgctgtggccgatcaagcagaagtacggc
cgcaacatctcgtgggccgacctgctgatcctgaccggcaacgtcgcgctcgaatcgatg
ggcttcaagaccttcggctacgcgggcggccgtgccgacacgtgggaaccggacgacgtc
tactggggttcggaaaagatctggctggaactgagcggcggcccgaacagccgttactcg
ggcgaccgtgaactcgagaacccgctcgcggccgtgcagatgggcctcatctacgtgaac
ccggaaggcccggacggcaacccggacccggttgcggcggcacgcgacatccgcgacacg
ttcgcgcggatggcgatgaacgacgaagagacggtcgcgctgatcgccggcggccacacg
ttcggcaagacgcacggcgcgggccccgcgacggacgtcggtccggagccggaagcggcg
ggcatcgagcagcaggggctcggctggaagagcgcgtatgcatcgggcaagggccacgat
gcgatcaccagcggcctcgaagtcacgtggacgtcgacgccgacgaagtggagccacgat
ttcttcaagcacctgttcagctacgaatgggaactgacgaagagcccggccggcgcgcac
cagtgggtcgcgaagggcgccgacgaagtgattccggatgcgttcgacgcgtcgaagaag
catcgcccgacgatgctgacgaccgacctgtcgctgcgtttcgacccggcctacgagaag
atctcgcgccgcttctacgagaacccggccgagtttgccgacgcgttcgcgcgcgcctgg
ttcaagctcacgcaccgcgacatggggccgcgtgcgcgctatctcggcccggaagtgccg
gccgaggaactgctgtggcaggacccgatcccggtcgtcgaccacccgctgatcgatgac
gcggacgtcgcggcgctgaaggcgaaggtgctcgcgtcgggcctgtcggtcgcgcagctc
gtgtcgaccgcgtgggcgtcggcctcgacgttccgcggttccgacaagcgcggcggcgcg
aacggtgcgcgcatccgcctcgcgccgcagaaagactgggaagtgaaccagccggccgcg
ctcgccgcggtgctcgagacgctcgaaggcgtgcgcaaggcgttcaacgatgcgcagacg
ggcggcaagaaggtgtcgctcgccgatctgatcgtgctggccggtgcggccggtatcgaa
caggccgcgaagaacgccggtgtcgcggtgacggtgccgttcgcaccgggccggatggac
gcgtcgcaggagcagacggacgtcgacgcgatggccgtgctcgagccggttgcggacggt
ttccgcaactacctgaagagtgcgtacaagacgccggccgaggcgctgctggtcgacaag
gcccagctgctgacgctgaacgggccggagctgacggtgctcgtcggcggcctgcgcgtg
ctcggcgcgaacgtcggcgacgcgaagcacggcgtgttcaccgaccgtccgggcacgctg
tcgaacgacttcttcgtgaacctgctcgacatgggcacggagtggaagccggtgtcggcc
gcgaacgacgtgttcgaagggcgcgatcgtgcgacgggcctggtcaagtggaccggcacg
cgcgtcgacctgatcttcggttcgcactcgcagttgcgcgcgctggccgaggtgtacggc
agcgcggacgcgaacgagaagttcgtgcgcgatttcgtcgcggcctgggacaaggtgatg
aacctcgaccgtttcgacctcgcgtga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-BAC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (1)   
   PROSITE (3)   
All databases (18)

DBGET integrated database retrieval system