KEGG B.ambifaria_MC40-6: BamMC406

Burkholderia ambifaria MC40-6: BamMC406_2213

Entry

BamMC406_2213 CDS B.ambifaria_MC40-6

Definition coproporphyrinogen III oxidase (EC:1.3.3.3)

Orthology K00228 coproporphyrinogen III oxidase [EC:1.3.3.3]

Pathway bac00860 Porphyrin and chlorophyll metabolism
bac01100 Metabolic pathways

Class Metabolism; Metabolism of Cofactors and Vitamins; Porphyrin and
chlorophyll metabolism [PATH:bac00860]

SSDB

Motif Pfam: Coprogen_oxidas
PROSITE: COPROGEN_OXIDASE

Other DBs NCBI-GI: 172061256
NCBI-GeneID: 6177910
JGI: BamMC4062213
UniProt: B1YU52

Position 1:2465908..2466828

AA seq 306 aa
MTDSTYDVPRVRTYLQGLQTRIADALGALDGTPLATDVWQRGPEERLRGGGCTRILEGGR
VFERAGIGFSDVAGDALPPSASAARPQLAGRGFEALGVSLVLHPRNPYCPTVHMNVRMLI
ATKPGEAPIFWFGGGMDLTPVYPFEDDARHFHQVCKDALDPFGAELYPRFKTWCDEYFFL
KHRNETRGIGGIFFDDFSEPGFERSFEMMQSVGDAFLNAYLPIVERRAALPYGERERDFQ
AYRRGRYVEFNLVFDRGTLFGLQSGGRTESILMSMPPVANWRYNWQPEPGSPEARLSEFL
VPRDWV

NT seq 921 nt +upstreamnt +downstreamnt
atgaccgattccacctacgacgtgccacgcgtgcgcacgtacctccagggcctgcagact
cgcatcgccgacgcactcggcgcgctcgacggcacaccgcttgcgaccgacgtatggcag
cgcggccctgaagagcggctgcgcggcggcggctgtacgcggattctcgaaggcggccgc
gtgttcgagcgcgcggggatcggtttttccgacgtcgcgggcgacgcgctgccgccgtcg
gcgagcgccgcgcgcccgcagctggccggccgcggcttcgaggcgctcggtgtgtcgctc
gtgctgcacccgcgcaacccatactgcccgaccgtgcacatgaacgtgcggatgctgatc
gcgacgaagccgggcgaggcgccgatcttctggttcggcggcggcatggatctgacaccg
gtttatccgttcgaggacgacgcgcggcatttccaccaggtctgcaaggacgcgctcgat
ccgttcggcgccgagctctacccgcgcttcaagacctggtgcgacgagtatttcttcctg
aagcaccgcaacgagacgcgcggcatcggcgggatcttcttcgacgatttctccgaaccc
ggattcgaacgctcgtttgagatgatgcaaagcgtcggcgacgcgttcctgaacgcgtac
ctgccgatcgtcgaacgccgcgccgcgctgccgtacggcgagcgcgagcgcgacttccag
gcttaccggcgcggccgctacgtcgaattcaacctcgtgttcgaccgcggcacgctgttc
ggcctgcaaagcggcggccggaccgaatcgatcctgatgtcgatgccgccggtcgcgaac
tggcgctacaactggcagcccgagccgggctcgccggaagcgcgcctgagcgagtttctc
gtgccgcgcgactgggtgtga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-BAC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (1)   
   PROSITE (1)   
All databases (15)

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