KEGG   Burkholderia ambifaria MC40-6: BamMC406_5037
Entry
BamMC406_5037     CDS       T00684                                 
Name
(GenBank) choline dehydrogenase
  KO
K00108  choline dehydrogenase [EC:1.1.99.1]
Organism
bac  Burkholderia ambifaria MC40-6
Pathway
bac00260  Glycine, serine and threonine metabolism
bac01100  Metabolic pathways
Module
bac_M00555  Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:bac00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    BamMC406_5037
Enzymes [BR:bac01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.99  With unknown physiological acceptors
    1.1.99.1  choline dehydrogenase
     BamMC406_5037
SSDB
Motif
Pfam: GMC_oxred_N GMC_oxred_C FAD_binding_2 Thi4 Lycopene_cycl TrkA_N NAD_binding_8
Other DBs
NCBI-ProteinID: ACB67483
UniProt: B1Z034
Position
2:2202868..2204568
AA seq 566 aa
MTTREYDYIICGAGSAGNVLATRLTEDPNVTVLLLEAGGPDYRFDFRTQMPAALAYPLQG
RRYNWAYETDPEPHMDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENWT
YLDCLPYFKKAETRDVGPNDYHGGDGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRTDDLN
GYQQEGFGPMDRTVTPKGRRASTARGYLDQAKGRPNLEIVTHALADRILFDGKRASGVTY
LRGSERANAHARREVLVCSGAIASPQLLQRSGVGPGAWLKELDIPIVLDLPGVGQNLQDH
LEMYIQYECKEPVSLYPALKWWNQPKIGLEWMLNGTGLGASNHFEAGGFIRTRDDDPWPN
IQYHFLPVAINYNGSNAIEMHGFQAHVGSMRSPSRGRVKLRSRDPNAHPSILFNYMAEAL
DWREFRDAIRATREIMRQPALDRYRGRELNPGADCKSDKELDTFVRSRAETAFHPSCSCK
MGYDDMAVVDEEGRVHGLEGLRVVDASIMPIITTGNLNAPTIMIAEKIADKIRGRQPLAR
VDVPYFVANGAMARNVAKAVRQPETV
NT seq 1701 nt   +upstreamnt  +downstreamnt
atgacgacacgcgaatacgactacatcatctgcggcgccggttccgcgggcaacgtgctc
gcgacgcgcctgacggaagatccgaacgtcacggtgctgctgctcgaagcgggcggcccc
gactaccgcttcgacttccgcacgcagatgccggcagcgctcgcctatccgctgcagggc
cgtcgctacaactgggcctacgagaccgaccccgagccgcacatggacaaccgccggatg
gaatgcggccgcggcaaggggctcggcggctcgtcgctgatcaacgggatgtgctacatc
cgcggcaacgcgctcgactacgacaactggtcgacgcacaaggggctcgagaactggacg
tatctcgactgcctgccgtacttcaagaaagccgagacgcgcgacgtcggcccgaacgac
tatcacggcggcgacggccccgtgtcggtcacgaccagcaagccgggcgtgaacccgctg
ttcgaggcgatggtcgatgcgggcgtgcaggccggctatccgcgcaccgacgacctgaac
ggctatcagcaggaaggcttcggcccgatggaccgcaccgtcacgccgaagggccgccgc
gcgagcaccgcgcgcggctacctcgaccaggcgaagggccggccgaacctcgagatcgtc
acgcacgcgctcgccgaccgcatcctgttcgacggcaagcgcgcgtcgggcgtcacgtac
ctgcgcggcagcgagcgcgcgaatgcgcacgcgcgccgcgaggtactcgtgtgcagcggc
gcgatcgcgtcgccgcagttgctgcagcgctcgggcgtcggccccggcgcatggctgaag
gaactcgacatcccgatcgtgctcgacctgcccggcgtcggccagaacctgcaggatcac
ctggagatgtacatccagtacgagtgcaaggagccggtgtcgctgtatccggcgctcaag
tggtggaaccagccgaagatcggcctcgaatggatgctgaacggcacgggcctcggcgcg
agcaaccacttcgaggcgggcggcttcatccgcacgcgcgacgacgatccctggccgaac
atccagtatcacttcctgcccgttgcgatcaactacaacggctcgaacgcgatcgagatg
cacggcttccaggcgcacgtcgggtcgatgcgttcgccgagccgcggccgcgtgaagctg
cgctcgcgcgatccgaacgcgcacccgagcatcctgttcaactacatggccgaagcgctc
gactggcgcgagttccgcgatgcgatccgcgcgacgcgcgagatcatgcggcagcccgcg
ctcgaccgctatcgcggccgcgagctgaacccgggcgccgactgcaagtccgacaaggag
ctcgacacgttcgtgcggtcccgcgcggaaaccgcgttccatccgtcgtgctcgtgcaag
atgggctacgacgacatggccgtggtcgacgaggaaggtcgcgtgcacgggctggaaggg
ctgcgcgtcgtcgatgcgtcgatcatgccgatcatcacgaccggcaacctgaacgcgccg
acgatcatgatcgcggagaagatcgccgacaagatccgcggccgccagccgcttgcgcgt
gtcgacgtgccctacttcgtcgcgaacggagcgatggcgcgcaatgtcgcgaaggcggtg
cggcagccggagacggtgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (7)   
   Pfam (7)   
All databases (24)   

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