KEGG B.ambifaria_MC40-6: BamMC406

Burkholderia ambifaria MC40-6: BamMC406_5625

Entry

BamMC406_5625 CDS B.ambifaria_MC40-6

Definition catalase/peroxidase HPI

Orthology K03782 catalase/peroxidase [EC:1.11.1.6]

Pathway bac00380 Tryptophan metabolism
bac00680 Methane metabolism
bac01100 Metabolic pathways

Class Metabolism; Energy Metabolism; Methane metabolism [PATH:bac00680]
Metabolism; Amino Acid Metabolism; Tryptophan metabolism
[PATH:bac00380]

SSDB

Motif Pfam: peroxidase
PROSITE: PEROXIDASE_1 PEROXIDASE_2 PEROXIDASE_4

Other DBs NCBI-GI: 172064909
NCBI-GeneID: 6182708
JGI: BamMC4065625
UniProt: B1Z5M2

Position 3:complement(127887..130112)

AA seq 741 aa
MQKKRIGKSVVAALAIIAMSAGTVAAWADGAPRTNDFWWPERLDLSPLRQHDVESNPYGK
DFDYAQAFNKLDIEAVKKDIRATLTTSQDWWPADYGNYGPFFIRMAWHGAGTYRTYDGRG
GAGGAQQRFEPLNSWPDNANLDKARRLLWPIKKKYGQNISWGDLMVLTGNVALESMGFQT
FGFGGGREDDWQSDLVYWGAGTKFMSDNRDKNGKLEKPLAATQMGLIYVNPEGPNGNPDP
VAAAKDIREAFGRMAMNDEETLALIAGGHTFGKAHGAASPDKCVGAAPAGAGVEAQGLGW
ANKCGTGKGADTITSGLEGAWSVDPVHFTMQYLDNLLEHDWVLTKSPAGAHQWMPKDAQD
IVPDAHDPSKRHPLMMFTTDIALKVDPAYSAIAKRFQAHPEEFKLAFAKAWFKLTHRDLG
PKARYLGKDVPKVDLIWQDPLPVAGYQMIGDADIAELKRRILASGVPKSELIKTAWASAA
SFRATDYRGGANGARIRLAPENAWAVNDPASLSKVLKSLEDIQSGFNRNRTDGKQVSLAD
LIVLGGSAAVEDAARKAGYDVKVPFSPGRVDATQAQTDVASFAVLEPTSDGFRNYYRKSN
ERSPAELMVDRASKLDLSVPEMTVLVGGLRALDANAGHSRLGVLTNRPGTLSNDFFVNLL
DMSTQWTKSSSADGTYEGRDRKTGALKWTASPVDLVFGSSSELRAVAEVYASDDAHEKFV
RDFVHAWTKVMNLDRFDLKRS

NT seq 2226 nt +upstreamnt +downstreamnt
atgcagaaaaaacgtatcggaaaatcggtcgtggccgcgctcgccatcatcgcgatgagt
gccggcaccgttgccgcgtgggccgacggtgcgccacgcacgaatgacttctggtggccg
gagcggctcgatctttcgccgctgcgtcagcacgacgtcgagtcgaatccgtacgggaag
gatttcgactatgcgcaggccttcaacaagctcgatatcgaggccgtgaagaaggatatc
cgcgcgaccctgacgacgtcgcaggactggtggccggcagactacggcaactatggaccg
ttcttcatccggatggcgtggcacggagcgggcacctatcgcacgtacgacggccggggc
ggcgccggcggcgcacagcagcgattcgagccgctgaacagctggccggataacgccaat
ctcgacaaggcgcgccgtttgttgtggccgatcaagaagaaatatggccagaatatttcg
tggggcgatttgatggtcctcaccggcaatgtcgcacttgaatccatgggttttcaaacc
ttcggctttggcggcggccgggaagacgactggcaatcggatctggtttattggggagcc
ggcacgaaattcatgtcggataaccgcgacaagaacggcaagctcgagaagccgctggcg
gccacccagatggggctgatctacgtgaacccggaaggtccgaacggcaaccctgatccc
gtcgccgcggcaaaggacattcgcgaggcgttcggccgcatggcgatgaatgacgaggag
accctcgcgctgatcgcgggcggtcataccttcggcaaggcccatggcgcggcgtcgccc
gacaaatgcgtgggcgcggcaccggcgggcgcgggcgtcgaagcgcaaggcctgggctgg
gcgaacaagtgcggtaccgggaagggcgccgacacgatcacgagcggccttgaaggcgca
tggtcggtcgaccccgttcacttcacgatgcagtatctcgacaatctgctcgaacacgat
tgggtgctgacgaagagcccggcaggcgctcatcagtggatgccgaaggacgcgcaggac
atcgtgccggacgcacacgatccgtcgaagcgacatccgctgatgatgtttacgaccgat
atcgcgttgaaggtcgatcccgcgtacagcgcgatcgccaagcgttttcaggcgcatccc
gaggaattcaagctggcgttcgcaaaggcgtggttcaagctgacgcaccgggatctgggc
ccgaaggcgcgctatctgggcaaggatgtgcccaaggtcgacctgatctggcaggatccg
ctgcccgttgccggctaccagatgatcggcgacgccgatatcgcggagctgaagcgcagg
atcctcgcatcgggggtgccgaagtcggaactgatcaagaccgcgtgggcgtccgcggcc
tcgttccgtgccaccgactaccgaggcggcgcaaatggcgcgcgcattcgcctcgcgccg
gaaaacgcctgggcggtgaatgacccggcgagcctgtcgaaagtgctgaagtcgctggaa
gacattcagtccggcttcaacaggaacagaacggatggcaagcaggtgtcgctggccgac
ctgatcgtgctgggcggcagcgcggccgtcgaggatgcggcccgcaaggcaggctacgac
gtcaaggttccattctcgccgggacgcgtcgatgcgacgcaggcgcagaccgatgtcgct
tccttcgccgttctcgagcccacctccgacgggttccgcaactactatcggaaaagcaat
gagcgatcgccggccgagttgatggtcgaccgcgcgagcaagctggatctctccgttccg
gagatgaccgttctcgtgggcgggctgcgtgcgctggacgccaatgcgggccattcaagg
ctcggtgtcctgaccaatcgtcccggcacgctgagcaacgacttcttcgtgaatctgctc
gacatgtcgacccaatggacgaagtcctcgagtgcagacgggacttacgaagggcgtgac
cgcaagacgggcgcgctcaagtggacggcaagcccggtcgatctggtgttcggttccagt
tcggagctgcgggccgttgccgaagtctatgcgtcggacgatgcgcacgagaagttcgtg
cgcgactttgtccacgcgtggacgaaagtgatgaacctcgatcgcttcgatctgaagcgc
agctga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-BAC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (1)   
   PROSITE (3)   
All databases (18)

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